Clone BO19681 Report

Search the DGRC for BO19681

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:196
Well:81
Vector:pDNR-Dual
Associated Gene/TranscriptCG31955-RA
Protein status:BO19681.pep: Imported from assembly
Sequenced Size:493

Clone Sequence Records

BO19681.complete Sequence

493 bp assembled on 2009-05-13

GenBank Submission: KX794780

> BO19681.complete
GAAGTTATCAGTCGACATGGAGGGGGACAAGGTAGTTTTTCATAGTTCTG
ATCTACCATACGAATATTTATACGACGACGAAAAACACGTTTCGCACATG
CCGGATTCCAAATTAAGTGTACGAAATATTTTGGATTCAGCTTACGCTTC
TGCTGAAGGCAAAATTATAACTAGGAAACTTTCGCGCAGCATTCCGCCGT
ATCCGCATGCTGTTCGAGTAAAAAATGGCATTCGTGTTTATGAATACAGT
GAGCCCAGAAAACAGAGCTACAAATCAAGTTTATGGAAGGAGGCCTACAA
TATACTCCACCAGCGGTTGGATATTGCCGAGCCAATCGCAGCAAAGGAAC
ACGTGAGAACGCAGATACATCCGTGTCTGCACAAGATCAAAGGACTTCTA
GATCCGGAAACCTGCATCAAGTGTCCGCGGTGTCATAAGTCCATTTCGTC
CACCAAAGTTGTGAAAAGCTTTGCAGCAAGCTTTCTAGACCAT

BO19681.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:47:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG31955-RD 462 CG31955-PD 1..459 17..475 2295 100 Plus
CG31955-RC 462 CG31955-PC 1..459 17..475 2295 100 Plus
CG31955-RA 462 CG31955-PA 1..459 17..475 2295 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG31955-RD 900 CG31955-RD 323..782 16..475 2300 100 Plus
CG31955-RC 777 CG31955-RC 84..543 16..475 2300 100 Plus
CG31955-RA 661 CG31955-RA 84..543 16..475 2300 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:47:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3712498..3712783 301..16 1430 100 Minus
2L 23513712 2L 3712272..3712445 475..302 870 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:47:01 has no hits.

BO19681.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:41:21 Download gff for BO19681.complete
Subject Subject Range Query Range Percent Splice Strand
CG31955-RA 81..539 17..477 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:19 Download gff for BO19681.complete
Subject Subject Range Query Range Percent Splice Strand
CG31955-RA 85..543 17..477 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:16:29 Download gff for BO19681.complete
Subject Subject Range Query Range Percent Splice Strand
CG31955-RA 85..543 17..477 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:16:29 Download gff for BO19681.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3712270..3712445 302..477 98 <- Minus
2L 3712498..3712782 17..301 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:19 Download gff for BO19681.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3712270..3712445 302..477 98 <- Minus
arm_2L 3712498..3712782 17..301 100   Minus

BO19681.pep Sequence

Translation from 16 to 493

> BO19681.pep
MEGDKVVFHSSDLPYEYLYDDEKHVSHMPDSKLSVRNILDSAYASAEGKI
ITRKLSRSIPPYPHAVRVKNGIRVYEYSEPRKQSYKSSLWKEAYNILHQR
LDIAEPIAAKEHVRTQIHPCLHKIKGLLDPETCIKCPRCHKSISSTKVVK
SFAASFLDH

BO19681.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:22:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG31955-PD 153 CG31955-PD 1..153 1..153 810 100 Plus
CG31955-PC 153 CG31955-PC 1..153 1..153 810 100 Plus
CG31955-PA 153 CG31955-PA 1..153 1..153 810 100 Plus
CG31955-PB 63 CG31955-PB 2..63 92..153 312 95.2 Plus