BO19681.complete Sequence
493 bp assembled on 2009-05-13
GenBank Submission: KX794780
> BO19681.complete
GAAGTTATCAGTCGACATGGAGGGGGACAAGGTAGTTTTTCATAGTTCTG
ATCTACCATACGAATATTTATACGACGACGAAAAACACGTTTCGCACATG
CCGGATTCCAAATTAAGTGTACGAAATATTTTGGATTCAGCTTACGCTTC
TGCTGAAGGCAAAATTATAACTAGGAAACTTTCGCGCAGCATTCCGCCGT
ATCCGCATGCTGTTCGAGTAAAAAATGGCATTCGTGTTTATGAATACAGT
GAGCCCAGAAAACAGAGCTACAAATCAAGTTTATGGAAGGAGGCCTACAA
TATACTCCACCAGCGGTTGGATATTGCCGAGCCAATCGCAGCAAAGGAAC
ACGTGAGAACGCAGATACATCCGTGTCTGCACAAGATCAAAGGACTTCTA
GATCCGGAAACCTGCATCAAGTGTCCGCGGTGTCATAAGTCCATTTCGTC
CACCAAAGTTGTGAAAAGCTTTGCAGCAAGCTTTCTAGACCAT
BO19681.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:47:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31955-RD | 462 | CG31955-PD | 1..459 | 17..475 | 2295 | 100 | Plus |
CG31955-RC | 462 | CG31955-PC | 1..459 | 17..475 | 2295 | 100 | Plus |
CG31955-RA | 462 | CG31955-PA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:47:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31955-RD | 900 | CG31955-RD | 323..782 | 16..475 | 2300 | 100 | Plus |
CG31955-RC | 777 | CG31955-RC | 84..543 | 16..475 | 2300 | 100 | Plus |
CG31955-RA | 661 | CG31955-RA | 84..543 | 16..475 | 2300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:47:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3712498..3712783 | 301..16 | 1430 | 100 | Minus |
2L | 23513712 | 2L | 3712272..3712445 | 475..302 | 870 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:47:01 has no hits.
BO19681.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:41:21 Download gff for
BO19681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31955-RA | 81..539 | 17..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:19 Download gff for
BO19681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31955-RA | 85..543 | 17..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:16:29 Download gff for
BO19681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31955-RA | 85..543 | 17..477 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:16:29 Download gff for
BO19681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3712270..3712445 | 302..477 | 98 | <- | Minus |
2L | 3712498..3712782 | 17..301 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:19 Download gff for
BO19681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3712270..3712445 | 302..477 | 98 | <- | Minus |
arm_2L | 3712498..3712782 | 17..301 | 100 | | Minus |
BO19681.pep Sequence
Translation from 16 to 493
> BO19681.pep
MEGDKVVFHSSDLPYEYLYDDEKHVSHMPDSKLSVRNILDSAYASAEGKI
ITRKLSRSIPPYPHAVRVKNGIRVYEYSEPRKQSYKSSLWKEAYNILHQR
LDIAEPIAAKEHVRTQIHPCLHKIKGLLDPETCIKCPRCHKSISSTKVVK
SFAASFLDH
BO19681.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:22:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31955-PD | 153 | CG31955-PD | 1..153 | 1..153 | 810 | 100 | Plus |
CG31955-PC | 153 | CG31955-PC | 1..153 | 1..153 | 810 | 100 | Plus |
CG31955-PA | 153 | CG31955-PA | 1..153 | 1..153 | 810 | 100 | Plus |
CG31955-PB | 63 | CG31955-PB | 2..63 | 92..153 | 312 | 95.2 | Plus |