Clone BO19682 Report

Search the DGRC for BO19682

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:196
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG14860-RB
Protein status:BO19682.pep: Imported from assembly
Sequenced Size:823

Clone Sequence Records

BO19682.complete Sequence

823 bp assembled on 2009-05-13

GenBank Submission: KX796371

> BO19682.complete
GAAGTTATCAGTCGACATGAAAAACCAAAACCTTCGCTGCATCGTAACCG
ATTGTTATAAGAGTGGTCAACAGGATAGTAGCTCCATGTACAAGTTCCCC
ATAAATCCGGTTGTCCGGCAGAAGTGGTTGGATAATATTGCGGACATAAA
AGATATTAACTTGTTCAATAGTCGGGTGTGTAGGCGGCACTTTGAGACAC
AATGTTTTGGCAAGACCAAGGTGTTTTCCTGGGCAGTTCCCACACTTTTC
TTGAATACAAAAGAGGTAGTGCACCAGGTCAGTAAGCCAAGCAGGAACTC
CTTCATTCGCAGATGCAGCGTCAGGAACTGCTCCTCACGATCTCCTCCAG
AACGACTGCACTTCTTTCCCTCGAATCCCGAAATGCGCAAGGCATGGATG
GAAATATGTCGGCTTACGGTGGACAACAAGTGGCTGTTTATTTGCGGCAG
ACACTTTCGCCGGACTTATCTGCCAAACAAGGGAAACCTTAGAAAGGACG
CCATTCCAGAGTTCCACTTAGGAACGGAGGAGGAGGATCCCCTCGGAAAG
AGCATCAAAAGTATGAAATCATGTGCTAATAGAAGTAATATCAGTTTCAA
GAGCGAGGATTCTGGCATTGACGAGGAAAGCTTTAAGGAGAGTAAGCCTC
ATAATAATCCATGCGCCAATTGCCTTGATCTCCAACAGCAATTGGCAGCA
GCTCATCTTCGCATTCAGCAACTTGAGGAAAGAAGGCAAGAGGAGACAGA
CAGTGATGATGATGAGGAGGGGGAGGAGGAGGAGCACATATTCATGCTAA
TGAAGGCAAGCTTTCTAGACCAT

BO19682.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG14860-RB 792 CG14860-PB 1..789 17..805 3945 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:19:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14860-RB 1603 CG14860-RB 52..840 17..805 3945 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14895133..14895683 255..805 2755 100 Plus
3R 32079331 3R 14894835..14895072 17..254 1190 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:19:54 has no hits.

BO19682.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:51 Download gff for BO19682.complete
Subject Subject Range Query Range Percent Splice Strand
CG14860-RB 52..840 17..807 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:15 Download gff for BO19682.complete
Subject Subject Range Query Range Percent Splice Strand
CG14860-RB 52..840 17..807 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:23:23 Download gff for BO19682.complete
Subject Subject Range Query Range Percent Splice Strand
CG14860-RB 52..840 17..807 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:23:23 Download gff for BO19682.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14894835..14895072 17..254 100 -> Plus
3R 14895133..14895683 255..807 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:15 Download gff for BO19682.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10720557..10720794 17..254 100 -> Plus
arm_3R 10720855..10721405 255..807 99   Plus

BO19682.pep Sequence

Translation from 16 to 823

> BO19682.pep
MKNQNLRCIVTDCYKSGQQDSSSMYKFPINPVVRQKWLDNIADIKDINLF
NSRVCRRHFETQCFGKTKVFSWAVPTLFLNTKEVVHQVSKPSRNSFIRRC
SVRNCSSRSPPERLHFFPSNPEMRKAWMEICRLTVDNKWLFICGRHFRRT
YLPNKGNLRKDAIPEFHLGTEEEDPLGKSIKSMKSCANRSNISFKSEDSG
IDEESFKESKPHNNPCANCLDLQQQLAAAHLRIQQLEERRQEETDSDDDE
EGEEEEHIFMLMKASFLDH

BO19682.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:22:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14860-PB 263 CG14860-PB 1..263 1..263 1419 100 Plus
CG10631-PA 3781 CG10631-PA 1664..1935 5..257 197 23.6 Plus
CG10631-PA 3781 CG10631-PA 2606..2789 8..183 172 29.2 Plus
CG10631-PA 3781 CG10631-PA 562..761 3..188 168 25.9 Plus
CG10631-PA 3781 CG10631-PA 1334..1502 8..174 155 30.6 Plus
CG10631-PA 3781 CG10631-PA 1425..1603 8..176 153 25.4 Plus