Clone BO19715 Report

Search the DGRC for BO19715

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:197
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG10931-RA
Protein status:BO19715.pep: Imported from assembly
Sequenced Size:1069

Clone Sequence Records

BO19715.complete Sequence

1069 bp assembled on 2009-05-13

GenBank Submission: KX799001

> BO19715.complete
GAAGTTATCAGTCGACATGGAATTGATTGAAACAGCTTCGACTCCTGGAG
ATTCCGAAACTGAAATCGCCATCCCGGAGGCCGCTTTCGATTCCTTTAAG
ATGCCTATGCTACCAAGTCAGTTCCATTTGGAGAACTCCATGTCTCCGGG
CTACGCCATTAAGCACTCGCTCCTCGGTCACAGTGGTTGCGTTACTGGTC
TAAAGTTTAGTTCGAATGGCGAGAACTTGGTCAGCAGCTCCGGCGATAGG
CTGCTTAAGCTCTGGGACTTGAGCGCAACCCGATGCATTCAATCGCTGGC
CGGGCACGGAGACGGAGTCAACGATGTCGCCTGGTCGGCGGCTGGATTAA
TTGCCAGTTGTAGCGATGACATGACCGTGCGTCTCTGGGATGCCCGCAGC
AAGCTCTGCGTCAAAGTTTTGGAGGGGCATTCCAGGTACAGTTTCTCCTG
CTGCTTTAATCCGCAGGCCAATCTGCTGGCCTCCACTAGCTTTGACGAAA
CAGTGCGCCTTTGGGATGTCCGCACTGGCAAAACGCTCAAAATCGTCCAC
GCCCACCAGGATCCCATAACATCGGTGGACTTCCACCGCGATGGCAATAT
TTTTGTCACCAGCAGCTATGATGGGCTGGTCCGCTTGTGGGACTCTAGCA
CCGGGCATGTGCTGAAGACTCTCGTTGACGTTGACAACATCCCGGTCGGA
TATGTGAAGTTCTCACCGAACGGACGCTACATCCTGTCGTCCACATTGAA
CAACACCCTTAGGCTATGGAACTACAAGAAGCCCAAGTGCATGAGGACCT
ATCGCGGGCATTTGAATGAGTTCTATTGCTCCAACTCCAATTTTTCCACC
ACCGGCGGCATTTGGATTGTCTCCGGCAGCGAGGATAATACGCTTTGCAT
CTGGAATCTGCAGACGAGGGAGCTGGTGCAAAAGATAAGCACGGAGGGCG
ACCAGATTTTGAGCACACATTGCCATCCCACGGCAAATGTGATTGCTAGC
GGCGCCCTACAAAATTCATATGCCATTAAAATCTGGAAGAGCAGCGAGAA
GGCAAGCTTTCTAGACCAT

BO19715.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:10:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG10931-RA 1038 CG10931-PA 1..1035 17..1051 5175 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:10:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG10931-RA 1202 CG10931-RA 84..1118 17..1051 5175 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:10:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17749018..17750052 17..1051 5175 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:10:29 has no hits.

BO19715.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:41:16 Download gff for BO19715.complete
Subject Subject Range Query Range Percent Splice Strand
CG10931-RA 84..1118 17..1053 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:00 Download gff for BO19715.complete
Subject Subject Range Query Range Percent Splice Strand
CG10931-RA 84..1118 17..1053 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:12:30 Download gff for BO19715.complete
Subject Subject Range Query Range Percent Splice Strand
CG10931-RA 84..1118 17..1053 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:12:30 Download gff for BO19715.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17749018..17750052 17..1053 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:00 Download gff for BO19715.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13636523..13637557 17..1053 99   Plus

BO19715.pep Sequence

Translation from 16 to 1069

> BO19715.pep
MELIETASTPGDSETEIAIPEAAFDSFKMPMLPSQFHLENSMSPGYAIKH
SLLGHSGCVTGLKFSSNGENLVSSSGDRLLKLWDLSATRCIQSLAGHGDG
VNDVAWSAAGLIASCSDDMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQ
ANLLASTSFDETVRLWDVRTGKTLKIVHAHQDPITSVDFHRDGNIFVTSS
YDGLVRLWDSSTGHVLKTLVDVDNIPVGYVKFSPNGRYILSSTLNNTLRL
WNYKKPKCMRTYRGHLNEFYCSNSNFSTTGGIWIVSGSEDNTLCIWNLQT
RELVQKISTEGDQILSTHCHPTANVIASGALQNSYAIKIWKSSEKASFLD
H

BO19715.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:21:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG10931-PA 345 CG10931-PA 1..345 1..345 1834 100 Plus
wds-PB 361 CG17437-PB 57..359 41..342 937 55.4 Plus
wds-PA 361 CG17437-PA 57..359 41..342 937 55.4 Plus
Lis-1-PG 411 CG8440-PG 86..409 39..341 372 28.8 Plus
Lis-1-PF 411 CG8440-PF 86..409 39..341 372 28.8 Plus
Lis-1-PG 411 CG8440-PG 309..411 68..169 197 36.9 Plus