Clone BO19725 Report

Search the DGRC for BO19725

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:197
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG1722-RA
Protein status:BO19725.pep: Imported from assembly
Sequenced Size:874

Clone Sequence Records

BO19725.complete Sequence

874 bp assembled on 2009-05-13

GenBank Submission: KX796611

> BO19725.complete
GAAGTTATCAGTCGACATGCCCAAGTCCAAGCAGAGATCGCCAATAAAAG
CGGCTACAAAACCGCTTAGCACAAAGAAGCTACAGTCCAAAGTCAAAAGT
GTCGGTAAGACCAAGCCGAAAATGCAGCAGAAATCCGTAAAGCAACCGCT
CAAGAAACCCATGAGACGATCTCCGCTGATGCGAGCCGCCCTCCAGCCCA
CCATTTTGGGCTTGGCCAAGGAAAAGCCGGTGAAAAAGTCGCGGGTGACC
TTCAAGAAGTCACATCGTCGGCCGCTGGACGCCATGCAATCCCTTGGGAT
GTCCCGCAGGACCAGACTCATAGACGCCAGTCCCCAGAGAAAGGCCAAGG
GTACTTCGGTACTGTTCCTGGGTAAGGATTCAAGGACCACCAAGATGCCC
AAGAAAATGAAGCCCTCAAGCGAAAAGCCTGCAAGCGAAAAAAATCAGTT
ACCCCGGTTAAAAAGACGGATGGAATTCCGAGTAATGACGAAAGCCGAGA
CTAGGGCTACCGACGGCGTGAACTTCTTCTGCAATCTCGGCGTAAAGATG
CAGCCACCGGTGACTCGGAAATATCAACAGCTGCAACAACGAGGTGAAGC
AGGATTTGAGGGAAGATTGGCAGGTGGAGAAGGTACTAGACCGGGTGACG
GCGCCTTGCGGAGACCAGTGAGAACCCAGCCATCTGGTCTGTCATCCCTA
GTCGGTAAAGTCGCCGGTATCGGTGCGTTCGCCAATGATGTGCTGGTCCC
GCTGACCGGCCGGTTGCCCATCATCGACTTTATCTCTACCAAAGAGTTCC
AGAATATGTCTGCCGCTTCGAAATGGAAGCCGCACTCGCGGAAAAATACC
CATTTAGCAAGCTTTCTAGACCAT

BO19725.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:26:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG1722-RA 843 CG1722-PA 1..840 17..856 4200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:26:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG1722-RA 1173 CG1722-RA 124..963 17..856 4200 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:26:37
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21250186..21251025 856..17 4200 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:26:38 has no hits.

BO19725.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:35 Download gff for BO19725.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 124..963 17..858 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:00 Download gff for BO19725.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 124..963 17..858 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:18:36 Download gff for BO19725.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 124..963 17..858 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:18:36 Download gff for BO19725.complete
Subject Subject Range Query Range Percent Splice Strand
X 21250184..21251025 17..858 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:00 Download gff for BO19725.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21121211..21122052 17..858 99   Minus

BO19725.pep Sequence

Translation from 16 to 874

> BO19725.pep
MPKSKQRSPIKAATKPLSTKKLQSKVKSVGKTKPKMQQKSVKQPLKKPMR
RSPLMRAALQPTILGLAKEKPVKKSRVTFKKSHRRPLDAMQSLGMSRRTR
LIDASPQRKAKGTSVLFLGKDSRTTKMPKKMKPSSEKPASEKNQLPRLKR
RMEFRVMTKAETRATDGVNFFCNLGVKMQPPVTRKYQQLQQRGEAGFEGR
LAGGEGTRPGDGALRRPVRTQPSGLSSLVGKVAGIGAFANDVLVPLTGRL
PIIDFISTKEFQNMSAASKWKPHSRKNTHLASFLDH

BO19725.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:57:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG1722-PA 280 CG1722-PA 1..280 1..280 1420 100 Plus