BO19731.complete Sequence
1210 bp assembled on 2009-05-13
> BO19731.complete
GAAGTTATCAGTCGTCATGGATCGCTATGAGAAGCTCAGTCGGCTGGGCG
AGGGCTCCTACGGTGTGGTCTACAAGTGCCGGGATCGGGAAACGGGTGCT
CTGGTGGCGGTCAAGAGGTTTGTGGAGTCCGAGGATGATCCAGCGATTCG
TAAAATTGCACTGCGAGAAATTAGGCTACTGAAGAACCTGAAGCATCCGA
ACCTTGTCTCCCTGCTAGAAGTGTTCCGACGGAAGCGACGCCTCCATCTG
GTCTTCGAGTTCTGCGAGCTGACCGTGCTGCACGAACTGGAGCGGCATCC
ACAGGGCTGCCCGGAGCACCTGACCAAACAGATCTGCTACCAGACCCTGC
TGGGCGTGGCCTACTGCCACAAGCAGGGCTGCCTACACCGCGACATCAAG
CCGGAGAACATTCTGCTGACGGCCCAGGGTCAGGTGAAGCTGTGTGACTT
CGGCTTCGCCCGGATGCTCAGTCCGGGCGAGAATTACACGGACTACGTGG
CCACCAGATGGTACCGGGCGCCGGAGCTGCTGGTGGGCGACACTCAGTAC
GGCACTCCGGTGGACGTCTGGGCCATCGGTTGCCTCTTCGCCGAGCTGGT
CCGGGGCGAGGCCCTCTGGCCAGGACGTAGCGATGTGGATCAGCTCTATC
TGATCCGCAAGACGCTCGGCGACCTGCTGCCGCGCCACATCCAGATCTTT
GGACAGAACGAGTACTTTAAGGGCATCACGCTGCCAGTGCCGCCGACGCT
GGAGCCGCTGGAGGACAAGATGCCGGCCAAGTCGCAGCAGAATCCCCTGA
CCATTGACTTTCTCAAGAAGTGCCTGGACAAGGATCCGACCAAGCGCTGG
TCCTGCGAGAAGCTCACAAAGCACTCCTACTTCGATGACTACATCGCTAA
GCAGCGCGAACTGGAGCACGTCAACAGCCTGGAGGCGGCCAATCTCCGCC
AGCAGCAGCTCGCCTCCCAGCAGTTCATGCTGGCCACGGCGGCCCAGCAG
CTCCAGACGGGTCCTGCTCAGGCGGCGGCCATCGCGGCGGCCCGGGATAA
ATCAAAGACTTCAAACACATCACTACCGCTGCTGCCTAGCACGCAGCATC
ATCATCACCCGCATCAAGATTACGTGAAGCTGCAGCCCCTGAACAAGAAT
GCAAACCTGCTACATCGCACCGAGCATCATCTGCCCACAATTGCAAGCTT
TCTAGACCAT
BO19731.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:14:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7236-RB | 1308 | CG7236-PB | 130..1305 | 17..1192 | 5880 | 100 | Plus |
| CG7236-RE | 1266 | CG7236-PE | 88..1263 | 17..1192 | 5880 | 100 | Plus |
| CG7236-RD | 1239 | CG7236-PD | 61..1236 | 17..1192 | 5880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:14:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7236-RB | 1540 | CG7236-RB | 267..1442 | 17..1192 | 5880 | 100 | Plus |
| CG7236-RE | 1739 | CG7236-RE | 466..1641 | 17..1192 | 5880 | 100 | Plus |
| CG7236-RD | 1482 | CG7236-RD | 209..1384 | 17..1192 | 5880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:14:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5712476..5713354 | 179..1057 | 4380 | 99.9 | Plus |
| 2L | 23513712 | 2L | 5712257..5712424 | 17..184 | 840 | 100 | Plus |
| 2L | 23513712 | 2L | 5713414..5713550 | 1056..1192 | 685 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 16:14:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy10 | 6006 | gypsy10 GYPSY10 6006bp | 2271..2331 | 146..205 | 131 | 70.5 | Plus |
BO19731.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:06 Download gff for
BO19731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7236-RA | 328..1503 | 17..1194 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:02 Download gff for
BO19731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7236-RD | 209..1384 | 17..1194 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:14:16 Download gff for
BO19731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7236-RD | 209..1384 | 17..1194 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:14:16 Download gff for
BO19731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5713416..5713550 | 1058..1194 | 98 | | Plus |
| 2L | 5712257..5712424 | 17..184 | 100 | -> | Plus |
| 2L | 5712482..5713354 | 185..1057 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:02 Download gff for
BO19731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5712257..5712424 | 17..184 | 100 | -> | Plus |
| arm_2L | 5712482..5713354 | 185..1057 | 100 | -> | Plus |
| arm_2L | 5713416..5713550 | 1058..1194 | 98 | | Plus |
BO19731.pep Sequence
Translation from 16 to 1210
> BO19731.pep
MDRYEKLSRLGEGSYGVVYKCRDRETGALVAVKRFVESEDDPAIRKIALR
EIRLLKNLKHPNLVSLLEVFRRKRRLHLVFEFCELTVLHELERHPQGCPE
HLTKQICYQTLLGVAYCHKQGCLHRDIKPENILLTAQGQVKLCDFGFARM
LSPGENYTDYVATRWYRAPELLVGDTQYGTPVDVWAIGCLFAELVRGEAL
WPGRSDVDQLYLIRKTLGDLLPRHIQIFGQNEYFKGITLPVPPTLEPLED
KMPAKSQQNPLTIDFLKKCLDKDPTKRWSCEKLTKHSYFDDYIAKQRELE
HVNSLEAANLRQQQLASQQFMLATAAQQLQTGPAQAAAIAAARDKSKTSN
TSLPLLPSTQHHHHPHQDYVKLQPLNKNANLLHRTEHHLPTIASFLDH
BO19731.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:57:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7236-PD | 412 | CG7236-PD | 21..412 | 1..392 | 2083 | 100 | Plus |
| CG7236-PE | 421 | CG7236-PE | 30..421 | 1..392 | 2083 | 100 | Plus |
| CG7236-PB | 435 | CG7236-PB | 44..435 | 1..392 | 2083 | 100 | Plus |
| CG7236-PC | 438 | CG7236-PC | 47..438 | 1..392 | 2083 | 100 | Plus |
| Cdk1-PA | 297 | CG5363-PA | 1..290 | 1..292 | 507 | 36.1 | Plus |
