BO19741.complete Sequence
1342 bp assembled on 2010-10-04
GenBank Submission: KX799822
> BO19741.complete
GAAGTTATCAGTCGACATGGAAGGAGGCACTTTCAATCTGATGAAAACAG
AATCCATTCCCAGCTGCCTGCTTCAGCCCATCCGGGCGGTCCCCAAGTGC
GTCAACTCAAAGGAGATCCTAAGCAGTTTGGCGCGGAATCCGCGAAAGAG
CCGCCTATATCCTCCCCATGGCGGTCACATGCGGTCCGTTGTGGGAACCT
TCTACAAGATCACGGACCAAATCGGTGAAATTGCGATAGGCACCAAGTTA
ACCGGCACCGTGCTGCTCGAGAGCCTGCCGGTCTTCTACGTGACCATCAA
TGGACCGGGCTCCAAGCTTTTGAAATGTCTAGCCATGGGGCAGGTGCAAC
TGCAGGAACTGGAGCAGCTGCCCGACTATGGCGAAATCTTTGCATTCTAC
GACAAGGCCGAGAATCGCATCTCTCGCATCGCCATTAATGCCCCCGTTCA
CCCCATGGGCTACTGTGCCTATATGATCGACGCTGCCAAATATACCAACA
TGTCCGGCATGGAGCGCATCTTCGCGCTGCCGGATGATCTCAAGAAGCTG
CCGGCGCTAACGATCAAATGCCGCCTGGTCAATGTGGCCCAGATGCATAT
ATTTATTACCCAAAATGTTAGACTGCGCGTCCTCGGCAGTAATGGCCTTG
AACTGTTGGTGGCCCTGATCAGGAATAGGACCAACATTCGGAAGATTCCA
TCCGCACAACTACCACCAATTTCGGGCGATGAGTACGGAAATATGGATGC
AAACGATCGGGAAGTGGCCAAATCTTTTGCACGATATAGACCCAAGCGTC
GCGAACGTGGTAGCATTGTACGCGTCCATGTCACCAGGATCGTTAGCCAT
GCCGAATTCTACGCCCGATTCGCTGATGGACCAACAGTGCCCACGTGGAG
CAAGAGTGTTATGAAAAGGGGCACAGGTGATTTTCGCGTCTGGGACATCG
TTCTGGCCCCATATCAGGGGCGATATCATCGCGCCAAAATCGTTGACATA
TTTCGCTGCCGTTACCGTGTCTACTTTCTGGACTTCGGCATCACCGAGTA
TACAAGCAAGAAAAATCTAACATTTTGCTATGAGCTGGAGAAAGCCCAGC
ACAATCTGGCCTTTAGATTTGAAATATTGGGAACACGCCGTCAGTGTCCC
ATACCTTACATAAACATCCTAGAGGGCATAAAGCATCTGGAGCACACAGT
ACTACGAAGCGATATCAATGTTCGCATCCATAACATTTTGAAAGACGGTG
GATATGTGATTCGTTTAATGAAACATATTCACGAGTGCCATATGATTCAC
TTGTTTGACGATTATTATTCGAATGCAAGCTTTCTAGACCAT
BO19741.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:21:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15042-RA | 1311 | CG15042-PA | 1..1308 | 17..1324 | 6540 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:21:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15042-RA | 1405 | CG15042-RA | 13..1320 | 17..1324 | 6540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:21:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18526947..18528254 | 1324..17 | 6540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:21:15 has no hits.
BO19741.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-04 17:50:45 Download gff for
BO19741.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15042-RA | 1..1308 | 17..1326 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:40 Download gff for
BO19741.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15042-RA | 13..1320 | 17..1326 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:16:08 Download gff for
BO19741.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15042-RA | 13..1320 | 17..1326 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:16:08 Download gff for
BO19741.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18526944..18528254 | 17..1326 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:40 Download gff for
BO19741.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18420977..18422287 | 17..1326 | 99 | | Minus |
BO19741.pep Sequence
Translation from 16 to 1342
> BO19741.pep
MEGGTFNLMKTESIPSCLLQPIRAVPKCVNSKEILSSLARNPRKSRLYPP
HGGHMRSVVGTFYKITDQIGEIAIGTKLTGTVLLESLPVFYVTINGPGSK
LLKCLAMGQVQLQELEQLPDYGEIFAFYDKAENRISRIAINAPVHPMGYC
AYMIDAAKYTNMSGMERIFALPDDLKKLPALTIKCRLVNVAQMHIFITQN
VRLRVLGSNGLELLVALIRNRTNIRKIPSAQLPPISGDEYGNMDANDREV
AKSFARYRPKRRERGSIVRVHVTRIVSHAEFYARFADGPTVPTWSKSVMK
RGTGDFRVWDIVLAPYQGRYHRAKIVDIFRCRYRVYFLDFGITEYTSKKN
LTFCYELEKAQHNLAFRFEILGTRRQCPIPYINILEGIKHLEHTVLRSDI
NVRIHNILKDGGYVIRLMKHIHECHMIHLFDDYYSNASFLDH
BO19741.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:35:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15042-PA | 436 | CG15042-PA | 1..436 | 1..436 | 2289 | 100 | Plus |
krimp-PA | 746 | CG15707-PA | 273..726 | 31..418 | 427 | 29.1 | Plus |