Clone BO19741 Report

Search the DGRC for BO19741

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:197
Well:41
Vector:pDNR-Dual
Associated Gene/TranscriptCG15042-RA
Protein status:BO19741.pep: Imported from assembly
Sequenced Size:1342

Clone Sequence Records

BO19741.complete Sequence

1342 bp assembled on 2010-10-04

GenBank Submission: KX799822

> BO19741.complete
GAAGTTATCAGTCGACATGGAAGGAGGCACTTTCAATCTGATGAAAACAG
AATCCATTCCCAGCTGCCTGCTTCAGCCCATCCGGGCGGTCCCCAAGTGC
GTCAACTCAAAGGAGATCCTAAGCAGTTTGGCGCGGAATCCGCGAAAGAG
CCGCCTATATCCTCCCCATGGCGGTCACATGCGGTCCGTTGTGGGAACCT
TCTACAAGATCACGGACCAAATCGGTGAAATTGCGATAGGCACCAAGTTA
ACCGGCACCGTGCTGCTCGAGAGCCTGCCGGTCTTCTACGTGACCATCAA
TGGACCGGGCTCCAAGCTTTTGAAATGTCTAGCCATGGGGCAGGTGCAAC
TGCAGGAACTGGAGCAGCTGCCCGACTATGGCGAAATCTTTGCATTCTAC
GACAAGGCCGAGAATCGCATCTCTCGCATCGCCATTAATGCCCCCGTTCA
CCCCATGGGCTACTGTGCCTATATGATCGACGCTGCCAAATATACCAACA
TGTCCGGCATGGAGCGCATCTTCGCGCTGCCGGATGATCTCAAGAAGCTG
CCGGCGCTAACGATCAAATGCCGCCTGGTCAATGTGGCCCAGATGCATAT
ATTTATTACCCAAAATGTTAGACTGCGCGTCCTCGGCAGTAATGGCCTTG
AACTGTTGGTGGCCCTGATCAGGAATAGGACCAACATTCGGAAGATTCCA
TCCGCACAACTACCACCAATTTCGGGCGATGAGTACGGAAATATGGATGC
AAACGATCGGGAAGTGGCCAAATCTTTTGCACGATATAGACCCAAGCGTC
GCGAACGTGGTAGCATTGTACGCGTCCATGTCACCAGGATCGTTAGCCAT
GCCGAATTCTACGCCCGATTCGCTGATGGACCAACAGTGCCCACGTGGAG
CAAGAGTGTTATGAAAAGGGGCACAGGTGATTTTCGCGTCTGGGACATCG
TTCTGGCCCCATATCAGGGGCGATATCATCGCGCCAAAATCGTTGACATA
TTTCGCTGCCGTTACCGTGTCTACTTTCTGGACTTCGGCATCACCGAGTA
TACAAGCAAGAAAAATCTAACATTTTGCTATGAGCTGGAGAAAGCCCAGC
ACAATCTGGCCTTTAGATTTGAAATATTGGGAACACGCCGTCAGTGTCCC
ATACCTTACATAAACATCCTAGAGGGCATAAAGCATCTGGAGCACACAGT
ACTACGAAGCGATATCAATGTTCGCATCCATAACATTTTGAAAGACGGTG
GATATGTGATTCGTTTAATGAAACATATTCACGAGTGCCATATGATTCAC
TTGTTTGACGATTATTATTCGAATGCAAGCTTTCTAGACCAT

BO19741.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:21:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG15042-RA 1311 CG15042-PA 1..1308 17..1324 6540 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:21:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG15042-RA 1405 CG15042-RA 13..1320 17..1324 6540 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:21:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18526947..18528254 1324..17 6540 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:21:15 has no hits.

BO19741.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-04 17:50:45 Download gff for BO19741.complete
Subject Subject Range Query Range Percent Splice Strand
CG15042-RA 1..1308 17..1326 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:40 Download gff for BO19741.complete
Subject Subject Range Query Range Percent Splice Strand
CG15042-RA 13..1320 17..1326 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:16:08 Download gff for BO19741.complete
Subject Subject Range Query Range Percent Splice Strand
CG15042-RA 13..1320 17..1326 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:16:08 Download gff for BO19741.complete
Subject Subject Range Query Range Percent Splice Strand
X 18526944..18528254 17..1326 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:40 Download gff for BO19741.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18420977..18422287 17..1326 99   Minus

BO19741.pep Sequence

Translation from 16 to 1342

> BO19741.pep
MEGGTFNLMKTESIPSCLLQPIRAVPKCVNSKEILSSLARNPRKSRLYPP
HGGHMRSVVGTFYKITDQIGEIAIGTKLTGTVLLESLPVFYVTINGPGSK
LLKCLAMGQVQLQELEQLPDYGEIFAFYDKAENRISRIAINAPVHPMGYC
AYMIDAAKYTNMSGMERIFALPDDLKKLPALTIKCRLVNVAQMHIFITQN
VRLRVLGSNGLELLVALIRNRTNIRKIPSAQLPPISGDEYGNMDANDREV
AKSFARYRPKRRERGSIVRVHVTRIVSHAEFYARFADGPTVPTWSKSVMK
RGTGDFRVWDIVLAPYQGRYHRAKIVDIFRCRYRVYFLDFGITEYTSKKN
LTFCYELEKAQHNLAFRFEILGTRRQCPIPYINILEGIKHLEHTVLRSDI
NVRIHNILKDGGYVIRLMKHIHECHMIHLFDDYYSNASFLDH

BO19741.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:35:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG15042-PA 436 CG15042-PA 1..436 1..436 2289 100 Plus
krimp-PA 746 CG15707-PA 273..726 31..418 427 29.1 Plus