BO19775.complete Sequence
841 bp assembled on 2009-05-13
GenBank Submission: KX800046
> BO19775.complete
GAAGTTATCAGTCGACATGTCCAAATATCTGATACACCTGTGCCTGGTGC
TGCTCTGGAGCTCTCGGATAAATGCAGATCACTTTGACGAATGTGACGGG
ATGGACGATGGGGCATTTGTACAAAGTTGGGAGAGCTGCCAATCCTACGT
GTACTGCGAGGGTGAGGAATCCCTAAAGGGCGATTGCGAGGATGGTGAAT
ACTTTGATTCCGAGGCGGGAACCTGTGATATTGCGGCCAATGTGTCATGT
TTCCTGGACGAAGTCGATGAACCCTCGGACCCGGAACCGGAAACAGACGA
AGAAGAGGAGGAAATACCCGCGACACCAAGACCAACCGAACCACCGATTG
TGGAGACCCCAACCGAAGTGGATATCATAAATATTGCGCCCGTTGTAAGG
CCCAACTGTCCGATCAGCGATGATCCCGGCCAGGTTATATTCATGGCCAG
CAATAATTCATGCACCAACTATTATCTCTGCTATCACGGCCATGCCATGG
AAATGCACTGTGATAATGAGCTGTACTTTAATTCCCTCACCGGACAGTGC
GATTACCCAGATAAAGTTCAGTGTGCCTTCGAAGATCCGCGATCCCACAA
GTGCCTGCCACACATGACCGAGTTCTTTCCACATCCGGACAACTGCAATT
ACTTCTACTACTGCATCAAGGGCTTTCTGACCCTGCAACAGTGCCCCTTC
TACTACGGCTGGGACATAGAACGCCGGAGTTGTGTGCAGATAGGTGTGGC
GAAATGCTATGGAAACTCCAGAAGAATAGGTCGGAAAGCCCCATTGCCAC
CCAGAAAACAACTCATCAAGTCTGCAAGCTTTCTAGACCAT
BO19775.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:44:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-H-RA | 810 | CG33983-PA | 1..807 | 17..823 | 4035 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:44:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-H-RA | 915 | CG33983-RA | 14..820 | 17..823 | 4035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:44:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15528670..15529230 | 577..17 | 2805 | 100 | Minus |
| 3L | 28110227 | 3L | 15528360..15528605 | 823..578 | 1230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:44:47 has no hits.
BO19775.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:38 Download gff for
BO19775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-H-RA | 1..807 | 17..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:35:25 Download gff for
BO19775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-H-RA | 14..820 | 17..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:15 Download gff for
BO19775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-H-RA | 14..820 | 17..825 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:15 Download gff for
BO19775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15528358..15528605 | 578..825 | 99 | <- | Minus |
| 3L | 15528670..15529230 | 17..577 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:35:25 Download gff for
BO19775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15521458..15521705 | 578..825 | 99 | <- | Minus |
| arm_3L | 15521770..15522330 | 17..577 | 100 | | Minus |
BO19775.pep Sequence
Translation from 16 to 841
> BO19775.pep
MSKYLIHLCLVLLWSSRINADHFDECDGMDDGAFVQSWESCQSYVYCEGE
ESLKGDCEDGEYFDSEAGTCDIAANVSCFLDEVDEPSDPEPETDEEEEEI
PATPRPTEPPIVETPTEVDIINIAPVVRPNCPISDDPGQVIFMASNNSCT
NYYLCYHGHAMEMHCDNELYFNSLTGQCDYPDKVQCAFEDPRSHKCLPHM
TEFFPHPDNCNYFYYCIKGFLTLQQCPFYYGWDIERRSCVQIGVAKCYGN
SRRIGRKAPLPPRKQLIKSASFLDH
BO19775.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:58:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-H-PA | 269 | CG33983-PA | 1..269 | 1..269 | 1524 | 100 | Plus |
| CG33985-PA | 277 | CG33985-PA | 14..267 | 12..248 | 519 | 37.6 | Plus |
| CG33986-PB | 277 | CG33986-PB | 38..266 | 16..247 | 302 | 28.2 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 1313..1512 | 25..246 | 202 | 25.2 | Plus |
| CG33263-PA | 227 | CG33263-PA | 4..222 | 3..186 | 178 | 25.1 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 1266..1432 | 86..239 | 155 | 26.3 | Plus |
