BO19796.complete Sequence
1459 bp assembled on 2009-05-13
GenBank Submission: KX800012
> BO19796.complete
GAAGTTATCAGTCGACATGGCCATTCTACAGAATAGCCGCCAGAGCCACA
AGCAACTCCCAATCATCAGCCAGACGATTCGCAGTGCTTGGTGCCAACAG
AGGCCGATTAATGCCATGCATCAGGATGTCCGGCAAAAAAGCATCGGATC
CGGAAACGAGACCAAACTGGAAGCGAAGGAGACGGAAGTTCCCACCAACA
GAAGAAGACGCAGAAGGCGTTGCAGCAGTAGCTCCACCAGCGACTCAAGC
GCATCCTCATATTCCTCAACAGACTCGGATTCCGGGTCCTCCACCAGCAG
CAGTAGCATAAGAAGCCAATTACCCGCCCTCAACTTGCCAGTGCCCCTCC
CGCTGGCGACACCCACTCCGCCCGCCGTTTCATCGCCTCACCAGGCGCCA
TCTCCTCGAAGGAACTCCAGCGACTCCAACCGGAGCGTCTCTCCCGTGGA
GGTGCCCGTGGATCCGCACGCTTGGACGCCCGAGGACATTGCCAGCTGGG
TGAGATGGGCGACGCGCAAGTTCAAACTGGACCCGGAGCCGGATATCGAC
AGGTTTCCCAAGGATGCCCAGGAGCTGTGCGATCTGTCTCGCGCGGACTT
CTGGGTCTGTGCAGGATCAAGGCGCGGAGGCATGCTCCTGGCGCAGCACT
TCGCGATCAGCTTATACCACGCCACCGGACGGGAGACGAGTCCGATGCTC
AACGACGACGAACCAAATCCGTACCAGCTGCTGAACGCTGCCTCGCACCG
ATTGGTTGCCCAAGGCTCAGGGGGCCAAATCCAGCTGTGGCAGTTTCTGC
TGGAGCTGCTCGCTGATTCGTCCAACGCGAACGCCATCAGCTGGGAGGGC
CAATCGGGCGAGTTCCGGCTCATCGACCCGGACGAGGTGGCCAGGCGGTG
GGGCGAGCGCAAGGCCAAACCGAACATGAACTACGACAAGCTGAGCCGGG
CACTCAGGTACTACTACGACAAGAACATCATGACCAAGGTGCACGGAAAG
CGGTATGCCTACAAGTTTGACTTCCACGGTCTGATGGCCGCATGCCAGGC
TCAGGCGCAGGGAGGAGATCCGGCCTCCAGTATGCTGGGTTCCTACAATC
ACCACGCCGGCGGTGCGATGCAGTTGGGCCGCCACCCGCCGCCACTGCAC
CACCATCCACAGCACTCACATCCGCACCACCAGCTGGGGCAGCCCCACTT
TCTGCACCCGCACCACTCGTCGCCCGCCTCGAACAGCTCCAGCCTGGGAT
TCCCCTCGTCCTCGACGGCCTCTTCGCAGGCCTCGCCCGGCCAGGCGCCC
GCCTCCTCCTCCGCCTCCACTTCGAATTTTACTGCTCCATTCCAAGGTGG
GACAGCCGGCGTAGACCCGGCCAGGACGTCCACATCTTCTGCGGGAAACT
ACGACCAGGGCCCGGTCACTCCCACCACAAATGCATTCAACGCAAGCTTT
CTAGACCAT
BO19796.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:33:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets21C-RD | 1428 | CG2914-PD | 1..1425 | 17..1441 | 7125 | 100 | Plus |
| Ets21C-RC | 1428 | CG2914-PC | 1..1425 | 17..1441 | 7125 | 100 | Plus |
| Ets21C-RA | 1428 | CG2914-PA | 1..1425 | 17..1441 | 7125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:33:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets21C-RD | 2892 | CG2914-RD | 1067..2491 | 17..1441 | 7125 | 100 | Plus |
| Ets21C-RC | 4461 | CG2914-RC | 598..2022 | 17..1441 | 7125 | 100 | Plus |
| Ets21C-RA | 2423 | CG2914-RA | 598..2022 | 17..1441 | 7125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:33:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 551158..551857 | 716..17 | 3500 | 100 | Minus |
| 2L | 23513712 | 2L | 547417..547903 | 1441..955 | 2435 | 100 | Minus |
| 2L | 23513712 | 2L | 547976..548218 | 959..717 | 1215 | 100 | Minus |
| 3L | 28110227 | 3L | 6118964..6119133 | 773..942 | 280 | 77.6 | Plus |
| 3L | 28110227 | 3L | 6121492..6121569 | 956..1033 | 240 | 87.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:33:56 has no hits.
BO19796.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:37 Download gff for
BO19796.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets21C-RA | 598..2022 | 17..1443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:34 Download gff for
BO19796.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets21C-RA | 598..2022 | 17..1443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:14:22 Download gff for
BO19796.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets21C-RA | 598..2022 | 17..1443 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:14:22 Download gff for
BO19796.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 547978..548218 | 717..957 | 100 | <- | Minus |
| 2L | 547414..547900 | 958..1443 | 99 | <- | Minus |
| 2L | 551158..551857 | 17..716 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:34 Download gff for
BO19796.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 547978..548218 | 717..957 | 100 | <- | Minus |
| arm_2L | 547414..547900 | 958..1443 | 99 | <- | Minus |
| arm_2L | 551158..551857 | 17..716 | 100 | | Minus |
BO19796.pep Sequence
Translation from 16 to 1459
> BO19796.pep
MAILQNSRQSHKQLPIISQTIRSAWCQQRPINAMHQDVRQKSIGSGNETK
LEAKETEVPTNRRRRRRRCSSSSTSDSSASSYSSTDSDSGSSTSSSSIRS
QLPALNLPVPLPLATPTPPAVSSPHQAPSPRRNSSDSNRSVSPVEVPVDP
HAWTPEDIASWVRWATRKFKLDPEPDIDRFPKDAQELCDLSRADFWVCAG
SRRGGMLLAQHFAISLYHATGRETSPMLNDDEPNPYQLLNAASHRLVAQG
SGGQIQLWQFLLELLADSSNANAISWEGQSGEFRLIDPDEVARRWGERKA
KPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGLMAACQAQAQGG
DPASSMLGSYNHHAGGAMQLGRHPPPLHHHPQHSHPHHQLGQPHFLHPHH
SSPASNSSSLGFPSSSTASSQASPGQAPASSSASTSNFTAPFQGGTAGVD
PARTSTSSAGNYDQGPVTPTTNAFNASFLDH
BO19796.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:58:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets21C-PD | 475 | CG2914-PD | 1..475 | 1..475 | 2525 | 100 | Plus |
| Ets21C-PC | 475 | CG2914-PC | 1..475 | 1..475 | 2525 | 100 | Plus |
| Ets21C-PA | 475 | CG2914-PA | 1..475 | 1..475 | 2525 | 100 | Plus |
| Ets21C-PB | 305 | CG2914-PB | 45..305 | 211..475 | 1307 | 93.2 | Plus |
| Ets65A-PB | 257 | CG7018-PB | 48..248 | 218..441 | 513 | 51.5 | Plus |
