BO19808.complete Sequence
898 bp assembled on 2009-05-13
GenBank Submission: KX795648
> BO19808.complete
GAAGTTATCAGTCGTTATGAATATTTTACCAAAAAAACGCTGGCATGTGC
GTACCAAGGAGAACATTGCCCGCGTGCGCCGGGATCAAGCGGCTGCCGCA
GCAGAAGAAAAAGTCCGGCAGGAGAAATTGGAATTTGCTGAAAGCGAGGC
ACGAATCAACTTCCTGCGCCGCCAATCGGGCTTGCCGGAGAAGGCCTCCA
AGGAATCTCGAGAGGAGTCGCAATGCAGTACTGAAACAACCAAAGGGGTG
GATCTCTTTGCCGACTACAAGGCGAGAGTGAAGACCACTAACAAAGACTT
GGAAAAGGAGCAAAAGGAGGAGCAGGAGAAGTATGAGAAGCAGATCGGCT
ACCTCACCTACTTGGGCCAGGACACCAATGAAGCTTTGAAAGTGCGCAGC
TGGTACGAGTTAGCCCCCAAAAGACCAGAAGTTGGGGATCCCACAGCTAC
TGAAACTCATCATAAGCAAAAGCTAGCCCACGATCCTCTGACCCTAATTA
ATGCTTTGTTGCCGCCAGAAAAAAAGGATCCCAAAAAGGCCACAAAAAGA
ATTCGCGAAAGGACACCCGCGCCTTCTCAGGAACCTTCAATACCCCACAA
GGACAAGAAATCCAAGAAAGATAAGAAGAAGCACAAGAGCAAAAATGGTT
CAAGGGAGACCCTTTTGGCCGAGGAACGCATAAAACGAGAAAAGCTCGAG
ACGCTAAGAAGGGAGCGCATGCGACGGGAAACAGCGGAACGCCAGCGTTC
CGAGGCTCTGTTCGCACCCAAGGAGCTGCCGGTGGCTGCCAGTGCCGAAT
CCACGCCGGCTTCGACGCCTAAGGTTGTCCAAAAGTACAACAGTCAGTTT
AATCCGGAGTTAGCAAAGCAAAATATGCTCGCAAGCTTTCTAGACCAT
BO19808.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:51:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12818-RA | 867 | CG12818-PA | 1..864 | 17..880 | 4320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:51:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12818-RA | 1001 | CG12818-RA | 39..902 | 17..880 | 4320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:51:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10331856..10332596 | 140..880 | 3705 | 100 | Plus |
| 3R | 32079331 | 3R | 10331697..10331798 | 39..140 | 510 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:51:53 has no hits.
BO19808.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:31 Download gff for
BO19808.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12818-RA | 39..902 | 17..882 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:59:59 Download gff for
BO19808.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12818-RA | 39..902 | 17..882 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:09:46 Download gff for
BO19808.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12818-RA | 39..902 | 17..882 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:09:46 Download gff for
BO19808.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10331619..10331641 | 17..39 | 100 | -> | Plus |
| 3R | 10331698..10331797 | 40..139 | 100 | -> | Plus |
| 3R | 10331856..10332596 | 140..882 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:59:59 Download gff for
BO19808.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6157341..6157363 | 17..39 | 100 | -> | Plus |
| arm_3R | 6157420..6157519 | 40..139 | 100 | -> | Plus |
| arm_3R | 6157578..6158318 | 140..882 | 99 | | Plus |
BO19808.pep Sequence
Translation from 16 to 898
> BO19808.pep
MNILPKKRWHVRTKENIARVRRDQAAAAAEEKVRQEKLEFAESEARINFL
RRQSGLPEKASKESREESQCSTETTKGVDLFADYKARVKTTNKDLEKEQK
EEQEKYEKQIGYLTYLGQDTNEALKVRSWYELAPKRPEVGDPTATETHHK
QKLAHDPLTLINALLPPEKKDPKKATKRIRERTPAPSQEPSIPHKDKKSK
KDKKKHKSKNGSRETLLAEERIKREKLETLRRERMRRETAERQRSEALFA
PKELPVAASAESTPASTPKVVQKYNSQFNPELAKQNMLASFLDH
BO19808.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:19:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12818-PA | 288 | CG12818-PA | 1..288 | 1..288 | 1468 | 100 | Plus |
