BO19835.complete Sequence
550 bp assembled on 2009-05-13
GenBank Submission: KX794685
> BO19835.complete
GAAGTTATCAGTCGACATGAAGCTCCTGATGCTCGGCACAATTTTGGCAT
TCTTTTCTGTAATCTCGGCGACAATGGCGGCTAACAAGGAGAGGACTTTC
ATCATGGTCAAGCCCGATGGCGTCCAGCGCGGGCTCGTCGGCAAGATCAT
CGAGCGCTTCGAGCAGAAGGGCTTCAAGCTGGTCGCCCTGAAGTTCACCT
GGGCCTCCAAGGAGCTGCTGGAGAAGCACTACGCTGATCTGTCCGCCCGC
CCCTTCTTCCCCGGACTCGTGAACTACATGAACTCCGGCCCCGTGGTGCC
CATGGTGTGGGAGGGTCTGAATGTGGTCAAGACCGGTCGCCAGATGCTCG
GCGCCACCAACCCCGCCGACTCGCTGCCCGGCACCATCCGCGGTGACTTC
TGCATTCAGGTCGGACGCAACATCATCCACGGCTCCGATGCCGTCGAGTC
TGCCGAGAAGGAGATCGCCCTGTGGTTCAACGAAAAGGAGCTGGTCACCT
GGACCCCGGCCGCCAAGGACTGGATCTACGAAGCAAGCTTTCTAGACCAT
BO19835.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:28:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| awd-RD | 507 | CG2210-PD | 1..504 | 29..532 | 2520 | 100 | Plus |
| awd-RC | 507 | CG2210-PC | 1..504 | 29..532 | 2520 | 100 | Plus |
| awd-RE | 462 | CG2210-PE | 1..459 | 74..532 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:28:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| awd-RD | 727 | CG2210-RD | 121..638 | 15..532 | 2590 | 100 | Plus |
| awd-RC | 634 | CG2210-RC | 28..545 | 15..532 | 2590 | 100 | Plus |
| awd-RE | 578 | CG2210-RE | 1..489 | 44..532 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:28:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31745261..31745591 | 532..202 | 1655 | 100 | Minus |
| 3R | 32079331 | 3R | 31745769..31745957 | 203..15 | 945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:28:51 has no hits.
BO19835.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:42 Download gff for
BO19835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| awd-RA | 79..594 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:16:07 Download gff for
BO19835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| awd-RC | 30..545 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:11:30 Download gff for
BO19835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| awd-RC | 30..545 | 17..534 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:11:30 Download gff for
BO19835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31745259..31745590 | 203..534 | 99 | <- | Minus |
| 3R | 31745770..31745955 | 17..202 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:16:07 Download gff for
BO19835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27570981..27571312 | 203..534 | 99 | <- | Minus |
| arm_3R | 27571492..27571677 | 17..202 | 100 | | Minus |
BO19835.pep Sequence
Translation from 16 to 550
> BO19835.pep
MKLLMLGTILAFFSVISATMAANKERTFIMVKPDGVQRGLVGKIIERFEQ
KGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEG
LNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEI
ALWFNEKELVTWTPAAKDWIYEASFLDH
BO19835.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:21:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| awd-PD | 168 | CG2210-PD | 1..168 | 5..172 | 877 | 100 | Plus |
| awd-PC | 168 | CG2210-PC | 1..168 | 5..172 | 877 | 100 | Plus |
| awd-PE | 153 | CG2210-PE | 1..153 | 20..172 | 808 | 100 | Plus |
| nmdyn-D6-PA | 151 | CG5310-PA | 2..147 | 25..167 | 156 | 29.5 | Plus |
