BO19836.complete Sequence
1414 bp assembled on 2010-10-20
GenBank Submission: KX799312
> BO19836.complete
GAAGTTATCAGTCGACATGGCAAAAAATCCAAAAAAGGAGGAGGACGGCG
GTAACGACTGGGCCCAAAGTGACGAGGACGACAACTGGGACGATTGGGGC
GATGACGATGACAAGTTCGTTCACGTGGAGAAGGAACAGCAGCCACAGGA
GAAAGTCTCGAGCAGAAACGACGCAAAAGGAACGGCGGAAAATCAGGAAA
AGCTGGAAACTCCCAGAATTTCTGCTCCAGCAACAGCATCCGCCACATCC
TCGTCCTGGGGTCTGTGGGGCGGTAAACTGAGCTCCGTGCTAACCACCGC
CACGGAGGGATTGGGCACGATAACCACCCAAGTCAACCAGGGGCTTAATC
AAATCATCGGAGTGCCCGATCCCGAGGAGCTGGCTCGCATTAATGTGGCT
GAAAAGGCGGAAAAGGCTGCTAAAGCGCCGCCAGAGGAAAATGTCGACGA
TGAAAAAGAATCTTCGGCCGCCTTTGGCTTGGACTTTGTCACCAATCTGG
GCTCCAAGGTTCTCAACACCGGACTGGATACACTCGAGGGCATTGGCAAG
AAGACCATGACCATCCTGCAGGACAACGATCCCAAGCTGATGAACAAGAG
GAAACTGCTCGGTCTGGAGGCCAACTCGCCTAATTTGAGTGCCGTGTTGC
TGGAGGCAAAGAAGGAGGCCGACCAAATGGAGCAATCCCTGCAACAGCTA
CAGCTGAAAAGACAGAAGGCGCAGCTGCGTTTCGAAATCCTTTTCGAAAA
TTACTGCGGCCTGGTGCACTTCGAGGCCCTGGAGATCCTTTCCAAGGAGT
CACGCCTCAAACTGGACACCCTACTCGATGCGGTTAGTGGCAATGCCCGT
GCAGAGTTGCAGGAAACGATAAACGAGGTGAAGGAACTGATCGAACTGGA
GGATCTGGATGTGGAGAGTGAAGGTGACTACGAGGCGGAGGAACTGAGCG
AGCGATTGGCGGCCACAATCAAGGACGCCGAGCTGGGCATTCAGTTTGAC
GACATAGCCAATCACTGGACGCAGTCCCTCAGCTGGTTGACCTCAGAGGA
AGCAACTGCCGCCGATCTGGAGCAAGCCTATGCTAAGAGCATCCACGCGC
TGAGTGAAGCGTGCGCCCTCGAGATGTGTAAGCTGCACAAAATCGCCGAG
CTGTTGCTGGTGAAGCCACATCACAGCACCGCCAACGAAGTGGATGGCGT
CGTCAATCTCTGCCAGCAGTTCAATGGACACCTTCAAGGACTTAGCCACC
GCTTCGCCGCCGTTCTGAGCGGCAAGTCAGAAACGGAGGAATCAAAAGGC
CGGGTCAGCACATTCTTTTCCGAAATGCTATCTGCCGTGCAGTTCATCGA
GAAGGCCTACAAGCTATTTACACCCATTCTCCAGATGGGAGCTGTGGCAA
GCTTTCTAGACCAT
BO19836.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:08:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9590-RA | 1383 | CG9590-PA | 1..1380 | 17..1396 | 6900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:08:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9590-RA | 1578 | CG9590-RA | 62..1441 | 17..1396 | 6900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:08:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15786764..15787758 | 17..1011 | 4975 | 100 | Plus |
3R | 32079331 | 3R | 15787818..15788202 | 1012..1396 | 1925 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:08:10 has no hits.
BO19836.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-20 10:47:39 Download gff for
BO19836.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9590-RA | 64..1443 | 17..1398 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:29:20 Download gff for
BO19836.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9590-RA | 62..1441 | 17..1398 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:10 Download gff for
BO19836.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9590-RA | 62..1441 | 17..1398 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:10 Download gff for
BO19836.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15786764..15787758 | 17..1011 | 100 | -> | Plus |
3R | 15787818..15788202 | 1012..1398 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:29:20 Download gff for
BO19836.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11612486..11613480 | 17..1011 | 100 | -> | Plus |
arm_3R | 11613540..11613924 | 1012..1398 | 99 | | Plus |
BO19836.pep Sequence
Translation from 16 to 1414
> BO19836.pep
MAKNPKKEEDGGNDWAQSDEDDNWDDWGDDDDKFVHVEKEQQPQEKVSSR
NDAKGTAENQEKLETPRISAPATASATSSSWGLWGGKLSSVLTTATEGLG
TITTQVNQGLNQIIGVPDPEELARINVAEKAEKAAKAPPEENVDDEKESS
AAFGLDFVTNLGSKVLNTGLDTLEGIGKKTMTILQDNDPKLMNKRKLLGL
EANSPNLSAVLLEAKKEADQMEQSLQQLQLKRQKAQLRFEILFENYCGLV
HFEALEILSKESRLKLDTLLDAVSGNARAELQETINEVKELIELEDLDVE
SEGDYEAEELSERLAATIKDAELGIQFDDIANHWTQSLSWLTSEEATAAD
LEQAYAKSIHALSEACALEMCKLHKIAELLLVKPHHSTANEVDGVVNLCQ
QFNGHLQGLSHRFAAVLSGKSETEESKGRVSTFFSEMLSAVQFIEKAYKL
FTPILQMGAVASFLDH
BO19836.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:38:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9590-PA | 460 | CG9590-PA | 1..460 | 1..460 | 2333 | 100 | Plus |