BO19838.complete Sequence
415 bp assembled on 2009-05-13
GenBank Submission: KX794103
> BO19838.complete
GAAGTTATCAGTCGACATGGAAGGCCAACGCGTGGCAGTCGTCGCATTTG
CTGTTTTGCTCGCCGGATTGTGCGTGCTATCCGGTCTGAATGCGGCACCC
GTGGAATGCAATAATGGCGGTGGCATCCAGATCTCTGACGATGGTTTCCA
GAGCCAGACGCAAACCGGTCCCGGCTGCCAGACCCAGACCTCCGAGGATG
GAACCCAGAGCCAAAGCCAGAGTCAGTCGGGCAATGGCTACCAATCGCAG
ACGCAGTGCAGCGGCTCATCCTGTGGTCAGTTCAACACCTTCCCGCCGCT
ATTCACCATTAAGCCGCTGGAGCCATTGGCACCCATCACTTGGCAGCCAT
GGGGGCAAATGAGGAACAACCAGGTGCAGCAGCAGGTCAATTTTGGCGCA
AGCTTTCTAGACCAT
BO19838.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:36:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5773-RC | 384 | CG5773-PC | 1..381 | 17..397 | 1905 | 100 | Plus |
| CG5773-RB | 384 | CG5773-PB | 1..381 | 17..397 | 1905 | 100 | Plus |
| CG5773-RA | 384 | CG5773-PA | 1..381 | 17..397 | 1905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:36:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5773-RC | 1285 | CG5773-RC | 83..465 | 15..397 | 1915 | 100 | Plus |
| CG5773-RB | 514 | CG5773-RB | 83..465 | 15..397 | 1915 | 100 | Plus |
| CG5773-RA | 586 | CG5773-RA | 155..537 | 15..397 | 1915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:36:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18043116..18043421 | 397..92 | 1530 | 100 | Minus |
| 2R | 25286936 | 2R | 18043513..18043590 | 92..15 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:36:17 has no hits.
BO19838.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:40 Download gff for
BO19838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5773-RA | 157..537 | 17..399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:42:57 Download gff for
BO19838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5773-RA | 157..537 | 17..399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:48:57 Download gff for
BO19838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5773-RA | 157..537 | 17..399 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:48:57 Download gff for
BO19838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18043114..18043421 | 92..399 | 99 | <- | Minus |
| 2R | 18043514..18043588 | 17..91 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:42:57 Download gff for
BO19838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13930619..13930926 | 92..399 | 99 | <- | Minus |
| arm_2R | 13931019..13931093 | 17..91 | 100 | | Minus |
BO19838.pep Sequence
Translation from 16 to 415
> BO19838.pep
MEGQRVAVVAFAVLLAGLCVLSGLNAAPVECNNGGGIQISDDGFQSQTQT
GPGCQTQTSEDGTQSQSQSQSGNGYQSQTQCSGSSCGQFNTFPPLFTIKP
LEPLAPITWQPWGQMRNNQVQQQVNFGASFLDH
BO19838.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:20:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5773-PC | 127 | CG5773-PC | 1..127 | 1..127 | 679 | 100 | Plus |
| CG5773-PB | 127 | CG5773-PB | 1..127 | 1..127 | 679 | 100 | Plus |
| CG5773-PA | 127 | CG5773-PA | 1..127 | 1..127 | 679 | 100 | Plus |
