Clone BO19842 Report

Search the DGRC for BO19842

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:198
Well:42
Vector:pDNR-Dual
Associated Gene/TranscriptEap-RA
Protein status:BO19842.pep: Imported from assembly
Sequenced Size:784

Clone Sequence Records

BO19842.complete Sequence

784 bp assembled on 2009-05-13

GenBank Submission: KX794438

> BO19842.complete
GAAGTTATCAGTCGACATGGCCAGTGATTCTGGCAGCGATTATGAGGTGG
AGGCTTTCTTCAATCCCAAGCGAGTTCAACGCACAGTCAACGACGACAGT
GCGGATCTATTGGGAAACTTCGATGACCAGAAGCGAAGGGAGATCTTCGA
GGGCACGTATGTGGACAAGGAGGACGGACGGAATCCCAGTGACCCGGAGG
ATAGTAAGAGCGAGGATGAGGCCAAGTCCGACGACGAGGCAGCCGCTGAG
GGCAGTGCTGCTTCCGGAGCCGAGGAAGAGGAATCTGCGGAAAATGGGCA
GATAACCAGTGACCAGCTGAGTTCACTGCTTCGAGGAGCCTCCAAAACCA
ACAGACACGTCCTGTACGTGACGAACCTGAACTTCGAAACCACAAAGGAC
GACCTGGAGCTGCACTTCTCTGCGGCAGGCACGGTCAAGTCTATCCGCAT
TCCCAAGAAGCGACGAGGGGGCTTCGCCTTTGTGGAAATGGCCGACCTAA
GCAGTTTCCAGAATGCCTTCCAGCTGCACAACACAGAGCTGCAGGGACGC
AACATCAAGGTGCAGATCTCCGAGGCGGGCAAGAAGAAGTCGGCCAACAA
GAAGAACATCATCAAACAGAAGAACCGAAAGCTGGCCGAGATGCGCAACG
AGCAGAAGACCTTCACGAAGAGCGGCAAGTTTTACGACAAGGACCTGAAA
AAGGAGAAGGCCAAGGAAATGCTGGCGCGAAAGCGGTGGCGCAAAAAGCC
CGCCCCCAGACCCACAGCAAGCTTTCTAGACCAT

BO19842.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:34:26
Subject Length Description Subject Range Query Range Score Percent Strand
Eap-RA 753 CG3594-PA 1..750 17..766 3750 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:34:27
Subject Length Description Subject Range Query Range Score Percent Strand
Eap-RA 863 CG3594-RA 42..791 17..766 3750 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:34:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24780958..24781707 17..766 3750 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:34:25 has no hits.

BO19842.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:39 Download gff for BO19842.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 14..763 17..768 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:18:08 Download gff for BO19842.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 42..791 17..768 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:13:13 Download gff for BO19842.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 42..791 17..768 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:13 Download gff for BO19842.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24780958..24781707 17..768 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:18:08 Download gff for BO19842.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20668481..20669230 17..768 99   Plus

BO19842.pep Sequence

Translation from 16 to 784

> BO19842.pep
MASDSGSDYEVEAFFNPKRVQRTVNDDSADLLGNFDDQKRREIFEGTYVD
KEDGRNPSDPEDSKSEDEAKSDDEAAAEGSAASGAEEEESAENGQITSDQ
LSSLLRGASKTNRHVLYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRR
GGFAFVEMADLSSFQNAFQLHNTELQGRNIKVQISEAGKKKSANKKNIIK
QKNRKLAEMRNEQKTFTKSGKFYDKDLKKEKAKEMLARKRWRKKPAPRPT
ASFLDH

BO19842.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:20:39
Subject Length Description Subject Range Query Range Score Percent Strand
Eap-PA 250 CG3594-PA 1..250 1..250 1271 100 Plus