BO19844.complete Sequence
271 bp assembled on 2009-05-13
GenBank Submission: KX794995
> BO19844.complete
GAAGTTATCAGTCGACATGAAATACCTAGTCGTTTTTGCACTCATCTGCT
GTCTTGTGGCATCAGCATTTGCGACTTTGAAAAACCCAATCTGTGGCGAG
GAGTTTGGCGTCAAGGGTACTTGCCGTTCCCTGCAACCCATGTGGACCTA
TCGCCCAGATACGAACGAGTGCTTCACCTTCAATTACTCCGGCTGCCACG
GAAACAATAATCTATTCCACAAAAAGTTGGAGTGCGAAGAAAAATGCAAA
ATAGCAAGCTTTCTAGACCAT
BO19844.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:41:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16704-RB | 240 | CG16704-PB | 1..237 | 17..253 | 1185 | 100 | Plus |
CG16704-RA | 240 | CG16704-PA | 1..237 | 17..253 | 1185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:41:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16704-RB | 350 | CG16704-RB | 48..284 | 17..253 | 1185 | 100 | Plus |
CG16704-RA | 335 | CG16704-RA | 48..284 | 17..253 | 1185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:41:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3692189..3692355 | 253..87 | 835 | 100 | Minus |
2L | 23513712 | 2L | 3692471..3692540 | 86..17 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:41:16 has no hits.
BO19844.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:37 Download gff for
BO19844.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16704-RA | 49..285 | 17..255 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:52:02 Download gff for
BO19844.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16704-RA | 48..284 | 17..255 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:02:49 Download gff for
BO19844.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16704-RA | 48..284 | 17..255 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:02:49 Download gff for
BO19844.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3692187..3692355 | 87..255 | 98 | <- | Minus |
2L | 3692471..3692540 | 17..86 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:52:02 Download gff for
BO19844.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3692187..3692355 | 87..255 | 98 | <- | Minus |
arm_2L | 3692471..3692540 | 17..86 | 100 | | Minus |
BO19844.pep Sequence
Translation from 16 to 271
> BO19844.pep
MKYLVVFALICCLVASAFATLKNPICGEEFGVKGTCRSLQPMWTYRPDTN
ECFTFNYSGCHGNNNLFHKKLECEEKCKIASFLDH
BO19844.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:20:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16704-PB | 79 | CG16704-PB | 1..79 | 1..79 | 448 | 100 | Plus |
CG16704-PA | 79 | CG16704-PA | 1..79 | 1..79 | 448 | 100 | Plus |
CG16713-PA | 82 | CG16713-PA | 1..80 | 1..77 | 169 | 43.2 | Plus |
CG16712-PB | 82 | CG16712-PB | 1..81 | 1..78 | 166 | 42.7 | Plus |
CG16712-PA | 82 | CG16712-PA | 1..81 | 1..78 | 166 | 42.7 | Plus |