BO19845.complete Sequence
901 bp assembled on 2009-05-13
GenBank Submission: KX798671
> BO19845.complete
GAAGTTATCAGTCGACATGCCACTGACTGCGGAGAGTGCCGCCCAACAGA
TTCAGGATCGCCTGAAGGACATTCAACAAAACATTCACAATGTGGACGAG
GAGCGTCGTCGTGCGGAAAACTCCATTGCTAGTCTGGTGCGATCTCTGCA
CGCCACCAATCAGAAGGTTAAGCCCCTGCTCAAGGCCAGTTTAACGGAGG
CTGCGCAGGAGGAGGCCACAATCCGAGCCGCACTGGCGAAAATCCACGAG
ATTCGAAGCATTCGCAATGAGAGGCGCATCCAAGCTCGCAACGCTGGAAA
TAAGGAGGCCATTCGACGGGGCGCCCTTATGAAAATGGTGCAGCTCTCAG
CGCAAACGTTGCCGTTATTCGTTGGCAAACTAGGAGAACGAGCACCAGCT
CTATGTGGAGCCATTCCCGCCGAGGGGAACTATGTGGCCAAGGTTGGCGA
CAATGTTGCCGCATTAGCTAAGGGAATTGATGAGGAGGAGAACTGGATCC
TGGCGGAAGTGGTGCAGTTCCTTCACCGTCAAAACAAATACGACGTAATT
GACATTGACGAGGAGCAAAAGGATCGCCATGTGCTGAGCAAGCGAAAGGT
CATCCCACTGCCTCTAATGCGTGCAAATCCTGAGACCGATGGTCACGCCC
TCTTCCCCAAGGACACAGTGGTAATGGCGCTATATCCACAGACCACCTGT
TTCTACAAGGCCATTGTCCATCGCCTGCCGCAAACCGCCACCGAGGATTA
CGAGGTGCTATTCGAGGATTCATCGTACACGAATGGCTATGCCGAACCCT
TGCCGGTCGCACAGCGCTATGTGATTGCATATCGTCCAACGAAAAAGGGG
GCTGGCAGTGGCAGCGGGAATCTATCATCAGCAGCAAGCTTTCTAGACCA
T
BO19845.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:09:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sgf29-RB | 870 | CG30390-PB | 1..867 | 17..883 | 4335 | 100 | Plus |
| Sgf29-RA | 870 | CG30390-PA | 1..867 | 17..883 | 4335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:09:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sgf29-RB | 1150 | CG30390-RB | 204..1072 | 15..883 | 4345 | 100 | Plus |
| Sgf29-RA | 1027 | CG30390-RA | 81..949 | 15..883 | 4345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:09:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21292317..21292759 | 883..441 | 2215 | 100 | Minus |
| 2R | 25286936 | 2R | 21293037..21293268 | 284..53 | 1160 | 100 | Minus |
| 2R | 25286936 | 2R | 21292825..21292986 | 444..283 | 810 | 100 | Minus |
| 2R | 25286936 | 2R | 21293320..21293361 | 56..15 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 11:09:49 has no hits.
BO19845.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:45:29 Download gff for
BO19845.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sgf29-RA | 83..949 | 17..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:40:11 Download gff for
BO19845.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sgf29-RA | 83..949 | 17..885 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:40:11 Download gff for
BO19845.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21293037..21293265 | 56..284 | 100 | <- | Minus |
| 2R | 21293321..21293359 | 17..55 | 100 | | Minus |
| 2R | 21292315..21292757 | 443..885 | 99 | <- | Minus |
| 2R | 21292827..21292984 | 285..442 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:45:29 Download gff for
BO19845.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17179820..17180262 | 443..885 | 99 | <- | Minus |
| arm_2R | 17180332..17180489 | 285..442 | 100 | <- | Minus |
| arm_2R | 17180542..17180770 | 56..284 | 100 | <- | Minus |
| arm_2R | 17180826..17180864 | 17..55 | 100 | | Minus |
BO19845.pep Sequence
Translation from 16 to 901
> BO19845.pep
MPLTAESAAQQIQDRLKDIQQNIHNVDEERRRAENSIASLVRSLHATNQK
VKPLLKASLTEAAQEEATIRAALAKIHEIRSIRNERRIQARNAGNKEAIR
RGALMKMVQLSAQTLPLFVGKLGERAPALCGAIPAEGNYVAKVGDNVAAL
AKGIDEEENWILAEVVQFLHRQNKYDVIDIDEEQKDRHVLSKRKVIPLPL
MRANPETDGHALFPKDTVVMALYPQTTCFYKAIVHRLPQTATEDYEVLFE
DSSYTNGYAEPLPVAQRYVIAYRPTKKGAGSGSGNLSSAASFLDH
BO19845.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:54:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sgf29-PB | 289 | CG30390-PB | 1..289 | 1..289 | 1458 | 100 | Plus |
| Sgf29-PA | 289 | CG30390-PA | 1..289 | 1..289 | 1458 | 100 | Plus |
