BO19848.complete Sequence
574 bp assembled on 2009-05-13
GenBank Submission: KX794096
> BO19848.complete
GAAGTTATCAGTCGACATGAACCTGGGAAGGCTGCTGAATCCACTGAGGA
GCACCGCATGTTCGGTGCGCAGCTACGGAAAGCACAACAAGAAGTTCCTC
TACAAAAATGGCCAGAAATTTGAGGGTATCACCTACTATCCCAGGACTCC
CGATCACCAGGATCCACCCGTGGAGCCGGCGAAACTTTTCCGGGTGCAGC
GCATCAAGCCGCTAAAGGGCAATCCCTACTGGGAGAATCGAATCCTCAAA
GATCTGGGACTAGACGGAAAGCAGAGCGATTTTACTGTCGTCAAGAACAT
ACCGGAGAACAATGCCCGCCTGTGGAAGATCAAGCATCTAATTAAGGTTA
CGCCGGTCACGTTCCCCTACGGAGAGCCCACTGCCCAGGATGTCCGGCAT
ACGATACTCAAGGAGAACGGCGAGTGCCTGGTAACCAAGGACCTGGGACC
CATCGATACCCGCCTGGCGGCTCGCCAGGATTACGACGAGCAGCCCAAGC
GACTGGATACCGATCTGCTGCGCAAAGATGCCCGCCTCAAGTGGCTAAAT
CCCTGGGCAAGCTTTCTAGACCAT
BO19848.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:06:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL30-RA | 543 | CG7038-PA | 1..540 | 17..556 | 2700 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:06:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL30-RA | 696 | CG7038-RA | 97..636 | 17..556 | 2700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:06:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4648172..4648586 | 142..556 | 2075 | 100 | Plus |
X | 23542271 | X | 4647967..4648095 | 17..145 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:06:21 has no hits.
BO19848.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:27 Download gff for
BO19848.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL30-RA | 91..630 | 17..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:06:50 Download gff for
BO19848.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL30-RA | 97..636 | 17..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:14:54 Download gff for
BO19848.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL30-RA | 97..636 | 17..558 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:14:54 Download gff for
BO19848.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4647967..4648094 | 17..144 | 100 | -> | Plus |
X | 4648175..4648586 | 145..558 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:06:50 Download gff for
BO19848.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4542000..4542127 | 17..144 | 100 | -> | Plus |
arm_X | 4542208..4542619 | 145..558 | 99 | | Plus |
BO19848.pep Sequence
Translation from 16 to 574
> BO19848.pep
MNLGRLLNPLRSTACSVRSYGKHNKKFLYKNGQKFEGITYYPRTPDHQDP
PVEPAKLFRVQRIKPLKGNPYWENRILKDLGLDGKQSDFTVVKNIPENNA
RLWKIKHLIKVTPVTFPYGEPTAQDVRHTILKENGECLVTKDLGPIDTRL
AARQDYDEQPKRLDTDLLRKDARLKWLNPWASFLDH
BO19848.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:54:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL30-PA | 180 | CG7038-PA | 1..180 | 1..180 | 978 | 100 | Plus |