BO19849.complete Sequence
967 bp assembled on 2010-11-19
GenBank Submission: KX793989
> BO19849.complete
GAAGTTATCAGTCGACATGCCAAGCTATTGCCTCATCATCGTCCTATGCC
TTCTTGGATCAGTGGCGGCTAAGTCTTCGGATGGAGATCGAGATCAGTGG
GTCTGGAGGTCCTACAATCGCAGGGAGCGCTCTTTTCGGGACATCAATCG
CAGTTCCCCCATAAGGAACTCGTACGACGAAAAGCTGAGGCGGGAGCCCA
CGACTCGAAGACCTTTTCCGGGCGAACCGGAGAATGATGAGATAGAGGAC
TATGCCGATGTGGAGCCCACCAGGTCATCGGACACTCCCAACGTAGGCAC
CCGTCAGTTTAATCCATACGGTGGTCAGACCAATGCCGGACAGTTCGGAG
GACTTGGAGGCTATAACGGAAACCCCGGAGTGCTAGTCGGACCTGGCGGA
CCCACCGGAATCATAGGGAGACCGCAGCTATACCCCACTCCCTATCAGCC
AGGCTATGGTGGATTCTCTGGAGCTCAAAATGGCATTAGTGGATATCCAG
GCGGATACGGAGGAGTAGGACAGGGACTTCCCGGAGCTGGATTCCCCGGA
GCCAGCGTGGGTGGTGGGTTTAACAACTTCCCCAGTAATGGACTTGGCCT
CAACCAATTTCCTGGCAATGGGCAATACCCTTACGGCTCCTATCCAGGTG
GCGACTTCGGTGGAAGCCAATTCGCGGGCGCAGGTGCCCAGTTCCCAGGA
TTGGGACAGTACCCAGCAAACCAACAGTTCGGTGGACCTCAGTACACCGA
GGGCTATGGTCTGGCAGGAGGACTGGGCTTAGGTCAACTTGGAGTAGGCA
ACGGTGGACTCGGATACGGTGGAAGTTTTCCACCTCTAGGAGGAGGCTTC
GGCTATGACGAGAAATCGCCAGCTGTGGCCGATGGTAAGAGTGCTAAGAG
TGTGGCAGCGTCACCCAGAAAAGTGAATGATAAGCTCAGTAAGAAGGTCG
CAAGCTTTCTAGACCAT
BO19849.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:35:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9192-RA | 936 | CG9192-PA | 1..933 | 17..949 | 4665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9192-RA | 1187 | CG9192-RA | 84..1017 | 16..949 | 4670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1237303..1238236 | 949..16 | 4670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:35:29 has no hits.
BO19849.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-19 09:48:54 Download gff for
BO19849.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9192-RA | 79..1011 | 17..951 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:33:20 Download gff for
BO19849.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9192-RA | 85..1017 | 17..951 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:18 Download gff for
BO19849.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9192-RA | 85..1017 | 17..951 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:18 Download gff for
BO19849.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1237301..1238235 | 17..951 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:33:20 Download gff for
BO19849.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1237301..1238235 | 17..951 | 99 | | Minus |
BO19849.pep Sequence
Translation from 16 to 967
> BO19849.pep
MPSYCLIIVLCLLGSVAAKSSDGDRDQWVWRSYNRRERSFRDINRSSPIR
NSYDEKLRREPTTRRPFPGEPENDEIEDYADVEPTRSSDTPNVGTRQFNP
YGGQTNAGQFGGLGGYNGNPGVLVGPGGPTGIIGRPQLYPTPYQPGYGGF
SGAQNGISGYPGGYGGVGQGLPGAGFPGASVGGGFNNFPSNGLGLNQFPG
NGQYPYGSYPGGDFGGSQFAGAGAQFPGLGQYPANQQFGGPQYTEGYGLA
GGLGLGQLGVGNGGLGYGGSFPPLGGGFGYDEKSPAVADGKSAKSVAASP
RKVNDKLSKKVASFLDH
BO19849.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:46:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9192-PA | 311 | CG9192-PA | 1..311 | 1..311 | 1707 | 100 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 308..492 | 101..279 | 219 | 37.1 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 376..537 | 101..291 | 211 | 36.5 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 308..481 | 101..280 | 209 | 36.8 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 376..548 | 101..291 | 207 | 36.1 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 265..443 | 102..279 | 201 | 39.2 | Plus |
| prc-PB | 1713 | CG5700-PB | 794..1026 | 84..280 | 192 | 35.1 | Plus |
| CG17108-PA | 342 | CG17108-PA | 134..329 | 98..299 | 188 | 34.6 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 265..443 | 102..279 | 182 | 37.7 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 243..417 | 102..279 | 173 | 36.1 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 236..417 | 114..279 | 172 | 38.5 | Plus |
| prc-PB | 1713 | CG5700-PB | 934..1136 | 101..276 | 172 | 36.4 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 242..377 | 145..279 | 170 | 40.6 | Plus |
| prc-PB | 1713 | CG5700-PB | 1050..1255 | 102..316 | 168 | 34.6 | Plus |
| prc-PB | 1713 | CG5700-PB | 526..689 | 102..279 | 167 | 38.8 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 442..598 | 101..263 | 166 | 35.5 | Plus |
| prc-PB | 1713 | CG5700-PB | 230..449 | 101..300 | 166 | 34.3 | Plus |
| prc-PB | 1713 | CG5700-PB | 305..551 | 102..300 | 165 | 33.5 | Plus |
| prc-PB | 1713 | CG5700-PB | 611..781 | 102..286 | 164 | 38.6 | Plus |
| prc-PB | 1713 | CG5700-PB | 744..925 | 101..276 | 156 | 36.2 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 502..604 | 101..219 | 154 | 37.7 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 442..606 | 101..285 | 152 | 36 | Plus |
