BO19850.complete Sequence
1255 bp assembled on 2009-05-13
GenBank Submission: KX797574
> BO19850.complete
GAAGTTATCAGTCGACATGCCAAGATTTCAAATAAAGAGTTTGGTCTTTC
TGGCCGGACTTATAGTTTTGGTTGGGGAGGCTAATTCCACCCTACGCCGA
ATACCCATTCAAAAGTCGCCAAACTTTAAGCGCAGCCACAAAAATATTGT
GGCAGAAAGGGATTTTGTTCAGCAGAAATACAATCGCCAATACACCGCTA
ATGGGTATCCCATGGAGCACCTGTCCAACTACGATAACTTTCAGTATTAT
GGAAATATAAGCATTGGAACCCCCGGCCAGGACTTTTTGGTACAATTCGA
CACCGGTTCCTCAAACCTTTGGGTTCCGGGAAGCTCGTGTATCAGCACAG
CGTGTCAGGATCACCAGGTCTTCTACAAAAATAAATCCAGTACCTATGTG
GCCAATGGAACGGCCTTTTCCATAACCTATGGAACTGGCAGTGTTTCTGG
TTATCTATCCGTGGATTGTGTAGGCTTTGCTGGCTTGACGATACAAAGTC
AGACATTCGGTGAGGTAACTACCGAGCAGGGAACAAATTTCGTAGATGCA
TACTTCGACGGAATACTGGGCATGGGATTCCCCTCTTTGGCCGTGGACGG
AGTTACCCCGACGTTTCAGAACATGATGCAGCAGGGACTCGTTCAAAGCC
CAGTGTTTTCATTTTTTCTGAGGGATAACGGCAGTGTAACTTTTTACGGA
GGTGAACTTATTTTGGGCGGCTCGGATCCCTCGCTTTACAGCGGTTCCCT
CACCTATGTGAATGTCGTTCAGGCCGCATATTGGAAATTCCAAACGGATT
ATATCAAAGTCGGTAGTACTTCCATTAGCACCTTTGCCCAAGCAATTGCG
GATACTGGAACATCTCTGATTATAGCTCCCCAGGCGCAATATGATCAGAT
TTCTCAATTGTTTAATGCTAATTCGGAGGGACTTTTCGAATGCAGTTCCA
CTTCCTACCCGGATCTAATAATCAACATTAATGGCGTGGACTTTAAAATC
CCAGCCAAATATTATATCATCGAGGAAGAAGATTTCTGTTCGCTGGCCAT
TCAATCTATAAACCAAGACTTTTGGATTATGGGAGATGTATTTTTGGGTC
GTATTTATACCGAATTCGATGTGGGCAATCAAAGGCTGGGATTCGCACCG
GTAAACTCAGCAGTTGGCTTAAGGAAAGCGGTTCTGTGGCGGATCTTCAC
TTTATTGCTGGCTTGTGGAATGTGGAAGCTGAAAAATGCAAGCTTTCTAG
ACCAT
BO19850.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:12:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pcl-RA | 1224 | CG13374-PA | 1..1221 | 17..1237 | 6105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:12:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pcl-RA | 1310 | CG13374-RA | 38..1260 | 15..1237 | 6115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:12:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 436189..437411 | 1237..15 | 6115 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:12:04 has no hits.
BO19850.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:25 Download gff for
BO19850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pcl-RA | 34..1254 | 17..1239 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:36:23 Download gff for
BO19850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pcl-RA | 40..1260 | 17..1239 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:05:43 Download gff for
BO19850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pcl-RA | 40..1260 | 17..1239 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:05:43 Download gff for
BO19850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 436187..437409 | 17..1239 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:36:23 Download gff for
BO19850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 330220..331442 | 17..1239 | 99 | | Minus |
BO19850.pep Sequence
Translation from 16 to 1255
> BO19850.pep
MPRFQIKSLVFLAGLIVLVGEANSTLRRIPIQKSPNFKRSHKNIVAERDF
VQQKYNRQYTANGYPMEHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSN
LWVPGSSCISTACQDHQVFYKNKSSTYVANGTAFSITYGTGSVSGYLSVD
CVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDGVTPTF
QNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNV
VQAAYWKFQTDYIKVGSTSISTFAQAIADTGTSLIIAPQAQYDQISQLFN
ANSEGLFECSSTSYPDLIININGVDFKIPAKYYIIEEEDFCSLAIQSINQ
DFWIMGDVFLGRIYTEFDVGNQRLGFAPVNSAVGLRKAVLWRIFTLLLAC
GMWKLKNASFLDH
BO19850.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:54:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pcl-PA | 407 | CG13374-PA | 1..407 | 1..407 | 2127 | 100 | Plus |
| Bace-PB | 372 | CG13095-PB | 5..371 | 12..379 | 959 | 51.8 | Plus |
| Bace-PA | 372 | CG13095-PA | 5..371 | 12..379 | 959 | 51.8 | Plus |
| CG17134-PA | 391 | CG17134-PA | 7..388 | 15..379 | 827 | 47.5 | Plus |
| CG33128-PA | 405 | CG33128-PA | 63..402 | 50..377 | 761 | 47.5 | Plus |
