BO19857.complete Sequence
1426 bp assembled on 2009-05-13
GenBank Submission: KX796394
> BO19857.complete
GAAGTTATCAGTCGACATGCTGCCTCTGCGCCGGAGTTTGCTCAAACCGC
TCCAGGATGTACTCCGACATAGCCACCGCCAGATGTCGCAGAAGAACCTC
TTGGAGCTCACAGATCGAGGCTTTTTCCACGGCATATTTCCTGATACAGC
GGCTCCCAGGATGAAACAGCTTTTTACCAGAGGCCAACAGAGCATCTACG
CAGGATTCGATCCCACCGCTGACAGTCTACACGTGGGCAATCTGCTTGTA
ATAATGGGCCTGATCCACTGCCAAAGAGCCGGCCACAGACCTATTGCCCT
AGTAGGAGGAGCAACTGGACTCATAGGGGATCCCAGTGGACGCAAGACAG
AGCGCAACCAACTGGGCGAGACGGTGATCGAGACCAATCTAAAGGCTATC
GAGCAACAGCTTCGCCGGGTGTTCGAAAATCACGAGAACTGCCTTTGGGA
CTCTAAGAAACAGAAATTGCCACTGGCTCCCCTAATAATCGTCAACAATG
CCGACTGGTATGCGGACCTGCAGCTCATCGACTTTGTGGCCAACATGGGA
CGACACTTTCGCATGGGGTCAATGCTCTCCAGATCCTCGGTGCAGTCCCG
CCTGGAGTCGGAGGACGGAATGAGCTTCACCGAGTTCACCTACCAGATTT
TCCAAGCCTACGACTGGCTGCACCTACTGCGCCGCCACAACTGCTGCTTT
CAAATGGGAGGCTCCGATCAGACGGGCAATTTAATGACTGGACACGAGCT
TATTAGCCGCGTAGAGCGAAAGCGAGAGGTCTTCGGGCTCACCCTGCCAT
TGGTCACGACGGAAGAGGGCGATAAGTTCGGCAAGTCGGCAGGCAATGCA
GTGTGGCTAGACGGTAACAAGACCTCGCCTTTCGCCCTCTACCAGTTTTT
CCTGCGCATGCCAGACTCCGAGGTCGAAAAGCTCCTGAAGCTGTTCACCT
TCATCCCGCTGCCCCAGGTGGAGCAGTTGATGCGGGAGCACACGAAGGAG
CCCGAGAAGCGGAAGGCGCAGACTCTGCTGGCTGAGGACGTGACTCTGCT
GGTTCATGGAGAAAGTGGGCTGAAGCAGGCGGAACGTGTGACCAATGCCT
TATACAAAGGCAACGTGGAGGGTTTAGCGGAACTCAACCTTTCCGAGATC
CAGCAGACTTTTCAGGGTGCTACTATGGTGAACCTGTTGACCGAGCCAGG
AATGTCCATCCTAGAGCTCGCCATGAAGGCGAAGTGCTTTCCCACGGAGA
CGGATGCTGTACGCATTATAAACGCAGGCGGATTTTACGTTAACCAGAAG
CGGGTGCAGAATATCGCCGAAGTGCTAACTACGGGCGTGCACATCCTGCG
CAACGGAATTTCTCTGCTGCGCGTGGGCAAACGCAACTTCTATATTGTGC
GCTGGCAAGCAAGCTTTCTAGACCAT
BO19857.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:50:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-tyr-m-RA | 1395 | CG16912-PA | 1..1392 | 17..1408 | 6960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:50:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-tyr-m-RA | 1540 | CG16912-RA | 72..1463 | 17..1408 | 6960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:50:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24782266..24782840 | 1061..487 | 2875 | 100 | Minus |
| 2R | 25286936 | 2R | 24782893..24783225 | 486..154 | 1665 | 100 | Minus |
| 2R | 25286936 | 2R | 24782019..24782209 | 1250..1060 | 955 | 100 | Minus |
| 2R | 25286936 | 2R | 24781803..24781960 | 1408..1251 | 790 | 100 | Minus |
| 2R | 25286936 | 2R | 24783293..24783429 | 153..17 | 685 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:50:22 has no hits.
BO19857.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:24 Download gff for
BO19857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16912-RA | 67..1458 | 17..1410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:26:16 Download gff for
BO19857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-tyr-m-RA | 72..1463 | 17..1410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:57:00 Download gff for
BO19857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-tyr-m-RA | 72..1463 | 17..1410 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:57:00 Download gff for
BO19857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24782019..24782207 | 1062..1250 | 100 | <- | Minus |
| 2R | 24781801..24781960 | 1251..1410 | 98 | <- | Minus |
| 2R | 24782266..24782840 | 487..1061 | 100 | <- | Minus |
| 2R | 24782893..24783225 | 154..486 | 100 | <- | Minus |
| 2R | 24783293..24783429 | 17..153 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:26:16 Download gff for
BO19857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20669542..20669730 | 1062..1250 | 100 | <- | Minus |
| arm_2R | 20669324..20669483 | 1251..1410 | 98 | <- | Minus |
| arm_2R | 20669789..20670363 | 487..1061 | 100 | <- | Minus |
| arm_2R | 20670416..20670748 | 154..486 | 100 | <- | Minus |
| arm_2R | 20670816..20670952 | 17..153 | 100 | | Minus |
BO19857.pep Sequence
Translation from 16 to 1426
> BO19857.pep
MLPLRRSLLKPLQDVLRHSHRQMSQKNLLELTDRGFFHGIFPDTAAPRMK
QLFTRGQQSIYAGFDPTADSLHVGNLLVIMGLIHCQRAGHRPIALVGGAT
GLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHENCLWDSKKQK
LPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESED
GMSFTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVE
RKREVFGLTLPLVTTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPD
SEVEKLLKLFTFIPLPQVEQLMREHTKEPEKRKAQTLLAEDVTLLVHGES
GLKQAERVTNALYKGNVEGLAELNLSEIQQTFQGATMVNLLTEPGMSILE
LAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHILRNGISL
LRVGKRNFYIVRWQASFLDH
BO19857.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:54:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-tyr-m-PA | 464 | CG16912-PA | 1..464 | 1..464 | 2402 | 100 | Plus |
