BO19863.complete Sequence
772 bp assembled on 2009-05-13
> BO19863.complete
GAAGTTATCAGTCGACATGTCTCTGACTATTACTTCCAGTGTCACTCATC
CTGAGCTCAAGGATCTGAGCACCGTTCGCAATGAACAAAAGGAACTGAAC
ATTTCGCCGGTTCACGATGTGAATGTCACAAAAGCCACGGCCACTTTCGG
CATGGGTTGCTTTTGGGGCGCAGAATCCCTGTATGGAGCCACCCGTGGAG
TTTTGAGAACCACCGTGGGCTACGCCGGAGGCAGCTCGGATTTGCCAACG
TACCGTAAAATGGGCGATCATACGGAGGTGCTGGAAATCGACTATGATCC
CAAGGTCATTAGCTTTAAGGAGCTGCTGGATCTGTTCTGGAACAACCATG
AGTATGGCCTGACCACGCCCATCAAGAGGCAGTACGCCTCCTTGATTCTG
TACCACGATGAGGAGCAGAAGCAGGTGGCACACGCCTCCAAATTGGAGGA
GCAAGAGCGCCGTGCACCGGAGATCATAACCACTGAGATTGCATCCAAGG
AGAACTTTTACCCAGCCGAGGCGTACCACCAGAAGTATAGGTTGCAGGGC
CACAAGGATCTCGCCTCATCGCTAAATCTCAGCCCCAAACTGCTGCAGAC
CAGCTATGTGGCCACCAAACTGAATGGCTACCTGGCCGGAGTCGGCGGCA
TCGAGCAGTTTAAGGCGGAGGCGGAGACCATGGGTCTGACGCCCACCCAG
CGGCAGTACTGCTACTACCACGTGGAGCAGAACGAGGGCCAGGGTCTCTA
CTGCGCAAGCTTTCTAGACCAT
BO19863.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:26:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip71CD-RG | 786 | CG7266-PG | 1..738 | 17..754 | 3660 | 99.7 | Plus |
| Eip71CD-RA | 741 | CG7266-PA | 1..738 | 17..754 | 3660 | 99.7 | Plus |
| Eip71CD-RB | 729 | CG7266-PB | 1..726 | 17..754 | 3445 | 98.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:26:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip71CD-RG | 980 | CG7266-RG | 67..805 | 16..754 | 3665 | 99.7 | Plus |
| Eip71CD-RA | 980 | CG7266-RA | 67..805 | 16..754 | 3665 | 99.7 | Plus |
| Eip71CD-RB | 968 | CG7266-RB | 67..793 | 16..754 | 3450 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:26:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15512476..15512739 | 262..525 | 1305 | 99.6 | Plus |
| 3L | 28110227 | 3L | 15512796..15513027 | 523..754 | 1160 | 100 | Plus |
| 3L | 28110227 | 3L | 15512171..15512366 | 67..262 | 965 | 99.5 | Plus |
| 3L | 28110227 | 3L | 15511118..15511169 | 16..67 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:26:26 has no hits.
BO19863.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:35 Download gff for
BO19863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip71CD-RA | 67..804 | 17..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:43:10 Download gff for
BO19863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip71CD-RA | 68..805 | 17..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:11:34 Download gff for
BO19863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip71CD-RA | 68..805 | 17..756 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:11:34 Download gff for
BO19863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15511119..15511169 | 17..67 | 100 | -> | Plus |
| 3L | 15512172..15512365 | 68..261 | 99 | -> | Plus |
| 3L | 15512476..15512736 | 262..522 | 99 | -> | Plus |
| 3L | 15512796..15513027 | 523..756 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:43:10 Download gff for
BO19863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15504219..15504269 | 17..67 | 100 | -> | Plus |
| arm_3L | 15505272..15505465 | 68..261 | 99 | -> | Plus |
| arm_3L | 15505576..15505836 | 262..522 | 99 | -> | Plus |
| arm_3L | 15505896..15506127 | 523..756 | 99 | | Plus |
BO19863.pep Sequence
Translation from 16 to 772
> BO19863.pep
MSLTITSSVTHPELKDLSTVRNEQKELNISPVHDVNVTKATATFGMGCFW
GAESLYGATRGVLRTTVGYAGGSSDLPTYRKMGDHTEVLEIDYDPKVISF
KELLDLFWNNHEYGLTTPIKRQYASLILYHDEEQKQVAHASKLEEQERRA
PEIITTEIASKENFYPAEAYHQKYRLQGHKDLASSLNLSPKLLQTSYVAT
KLNGYLAGVGGIEQFKAEAETMGLTPTQRQYCYYHVEQNEGQGLYCASFL
DH
BO19863.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:19:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip71CD-PA | 246 | CG7266-PA | 1..246 | 1..246 | 1286 | 99.6 | Plus |
| Eip71CD-PG | 261 | CG7266-PG | 1..246 | 1..246 | 1286 | 99.6 | Plus |
| Eip71CD-PB | 242 | CG7266-PB | 1..242 | 1..246 | 1249 | 98 | Plus |
| Eip71CD-PF | 245 | CG7266-PF | 16..245 | 17..246 | 1207 | 99.6 | Plus |
| Eip71CD-PE | 239 | CG7266-PE | 11..239 | 18..246 | 1203 | 99.6 | Plus |
