Clone BO19881 Report

Search the DGRC for BO19881

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:198
Well:81
Vector:pDNR-Dual
Associated Gene/TranscriptCG6751-RA
Protein status:BO19881.pep: Imported from assembly
Sequenced Size:1411

Clone Sequence Records

BO19881.complete Sequence

1411 bp assembled on 2009-05-13

GenBank Submission: KX794308

> BO19881.complete
GAAGTTATCAGTCGACATGGCTGAGGAAGGACCACCGGAGCCGAGCATTG
ATTTTGTCCCAGCTCTTTGCTTTGTACCACGCGGCGTGGCTAAGGATCGT
CCCGACAAGATCGTGCTGACGCAGGCGGAGCTGGCCAGGATTATCGGTGA
TACGCAACAGGAATTGGACGAGGAGAGCGACGACGATGCAGAGGAGGGCG
AAAATGCCGAGGAAGACCAAAACGACATGGATGTGGACGACCACGCGGAT
GCCAATAGTGAGAACCGCGATCCGCAGGACGAGTTCCAATTCCAGGAGTA
TGACAACGAGGCGAATGCTAATGTCACCAGTCTGGCCAACATCGTGGACG
CTGGCGAGCAAATCCCCGATGAGGACGAAGACTCCGAGGCCGAGGACGAG
GTGATCAAGCCCAGCGACAACCTCATTCTAGTGGGTCACGTTCAAGACGA
CGCCGCCTCCATGGAGGTGTGGGTTTTCAACCAGGAGGAGGAGGCTCTCT
ACACCCACCACGACTTTCTGCTGCCAAGCTTTCCTCTGTGCATCGAGTGG
ATGAATCACGACGCGGGCAGCGAAAAGGCGGGCAACATGTGCGCCATCGG
CTGCATGGATCCGATAATCACAGTCTGGGATCTAGACATACAGGACGCTA
TCGAGCCCACATTTAAGCTGGGTTCCAAAGGCAGCCGGAAGCAGAACAAA
GAGCAGTATGGACACAAGGACGCCGTGCTGGATCTCTCTTGGAACACCAA
CTTTGAGCACATTCTGGCCAGCGGGTCCGTGGACCAAACTGTGATTCTGT
GGGACATGGACGAGGGCCAGCCTCATACAACCATTACCGCTTTTGGCAAA
CAGATTCAGTCGCTGGAATTCCATCCGCAAGAGGCTCAAAGCATTCTTAC
CGGCTGTGCCGATGGATACGTGCGACTCTTCGATTGCCGCGACGCTGAGG
GCGTCAACTCGTCCAGCATTGAGTGGAAAGTTGACGGTGAAGTGGAGAAG
GTCCTGTGGCATCCCACACAGACCGACTACTTCATCGTGGGCACCAACGA
TGGCACCTTGCATTACGCCGACAAACGTTCTCCTGGACAACTGCTGTGGT
CCGTAAAGGCCCACAACGAGGAAATCTCCGGTGTGTGCTTCAACAACCAG
AAGCCTAATCTGCTGACCTCCACCTCCACGGAGGGCACCCTAAAGGTGTG
GAACTTTGATGGCACAGAGGCAAAGCACGTCTACGAGCACGAGTTCAACA
TGGGTCGCTTGCAGTGCATGCGCCAGTGCCCCGAGGATCCCTACACCCTG
GCCTTCGGCGGAGAGAAGCCTCCGCGCTGTGCGATCTTTAACATCAAGAA
CTCGATAGCCGTGCGCCGAACGTTTGGAATCCCTGATGCAGAGGCAAGCT
TTCTAGACCAT

BO19881.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
nclb-RA 1380 CG6751-PA 1..1377 17..1393 6885 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
nclb-RA 1549 CG6751-RA 90..1466 17..1393 6885 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10875837..10877213 17..1393 6885 100 Plus
Blast to na_te.dros performed on 2014-11-27 23:41:41 has no hits.

BO19881.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:30 Download gff for BO19881.complete
Subject Subject Range Query Range Percent Splice Strand
CG6751-RA 84..1460 17..1395 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:35:38 Download gff for BO19881.complete
Subject Subject Range Query Range Percent Splice Strand
nclb-RA 90..1466 17..1395 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:06:20 Download gff for BO19881.complete
Subject Subject Range Query Range Percent Splice Strand
nclb-RA 90..1466 17..1395 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:06:20 Download gff for BO19881.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10875837..10877213 17..1395 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:35:38 Download gff for BO19881.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6763342..6764718 17..1395 99   Plus

BO19881.pep Sequence

Translation from 16 to 1411

> BO19881.pep
MAEEGPPEPSIDFVPALCFVPRGVAKDRPDKIVLTQAELARIIGDTQQEL
DEESDDDAEEGENAEEDQNDMDVDDHADANSENRDPQDEFQFQEYDNEAN
ANVTSLANIVDAGEQIPDEDEDSEAEDEVIKPSDNLILVGHVQDDAASME
VWVFNQEEEALYTHHDFLLPSFPLCIEWMNHDAGSEKAGNMCAIGCMDPI
ITVWDLDIQDAIEPTFKLGSKGSRKQNKEQYGHKDAVLDLSWNTNFEHIL
ASGSVDQTVILWDMDEGQPHTTITAFGKQIQSLEFHPQEAQSILTGCADG
YVRLFDCRDAEGVNSSSIEWKVDGEVEKVLWHPTQTDYFIVGTNDGTLHY
ADKRSPGQLLWSVKAHNEEISGVCFNNQKPNLLTSTSTEGTLKVWNFDGT
EAKHVYEHEFNMGRLQCMRQCPEDPYTLAFGGEKPPRCAIFNIKNSIAVR
RTFGIPDAEASFLDH

BO19881.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:19:14
Subject Length Description Subject Range Query Range Score Percent Strand
nclb-PA 459 CG6751-PA 1..459 1..459 2471 100 Plus
Caf1-PB 429 CG4236-PB 228..415 232..409 167 26.8 Plus
Caf1-PA 430 CG4236-PA 229..416 232..409 167 26.8 Plus