Clone BO19915 Report

Search the DGRC for BO19915

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:199
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG33332-RA
Protein status:BO19915.pep: Imported from assembly
Sequenced Size:1081

Clone Sequence Records

BO19915.complete Sequence

1081 bp assembled on 2011-03-18

GenBank Submission: KX798789

> BO19915.complete
GAAGTTATCAGTCGACATGTCCAGCGACGACAATAGTAGTGATAGCAATT
CGTCCAGCGATGAAAGGCAAAGGAAACGGAAGCTTAAGAAGCACAGCAAA
GATGTGGACAAGTCCAAAAAGAAGAAGTCGAAAAAGCACAAGAAAGAAAA
GCGTCGCCACAAGGAGAAGAAACGCAGCAAGCATGAGGAGGAGCCACCTG
TGCCTTACACGCAACCTCCACATTTAATTAATGCATCTCCGCCAGATGTG
GCTACAAACAACGAAGATTCCTTTGGTCCCGCTTTACCGCCGCATTTAAG
GAAGACCCAGCAGCCGGAACTCCCTGAGCAAAGCCAACCAGCCCCACAAC
CGCAGGCCATGATAGGACCCGTCCTGCCCAGCAATTTGACCCGGGAAAAG
TCTCCTACTAAGGAAGCGGAAGCTGAGGACGATGATGACCTAGCTGGCAC
CTTTGGTCCTCTGCCAAATGCCAGTCAAGTGGCTCTGGAGGAACGTGCTT
TGGCACTTAAACTGGCAGCTCTGGAGGGCGGGGGATTGGGTACATCTACA
GACCAAGATGTCCGCGAAGAGTGGATGCTTGAGCTGCCAGATGTGGGACT
GAAGAGCGGCCTTGCCGCCCTGAGCAATATGAAGCGCACTTTCTATCAGG
GAAAAGAGCGACCCGACTTTAGCGATCGATCATCCTGGACGAAGACCCCG
CAGAGTGAAGCGGATGCTGCTGCATCGGGCCCAAAGTCGCTCAGTTCGAA
GGAACTCGAGCAAATGGCACAGGTCAAGTACGAACAGCAGCGGGATGACG
AGCAGGAGAGCATGGCCAAGAGGCACAAAAAGAAGCACAAGCGAGAGGAG
TCCCTAGTGGAGCTACATCAAAAAAAGCTTAGGAAAGAGCAGAGAGAAAA
GGAAAAAGAACTGGCTGCATCGGGTTCCAAGCCAGAACGAAGACCTTTTA
GTAGGGATGTGGACTTGAAACTTAACAAGATCGACAAGAATCAGACCAAG
CAGATTGTAGACAAGGCCAAGATATTGAACACCAAGTTCTCCAGGGGTCA
AGCTAAGTATCTGGCAAGCTTTCTAGACCAT

BO19915.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:31:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG33332-RA 1050 CG33332-PA 1..1047 17..1063 5235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:31:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG33332-RA 1315 CG33332-RA 78..1125 16..1063 5240 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14887849..14888735 16..902 4435 100 Plus
3R 32079331 3R 14888792..14888956 899..1063 825 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:31:30 has no hits.

BO19915.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-18 10:00:34 Download gff for BO19915.complete
Subject Subject Range Query Range Percent Splice Strand
CG33332-RA 58..1104 17..1065 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:24 Download gff for BO19915.complete
Subject Subject Range Query Range Percent Splice Strand
CG33332-RA 58..1104 17..1065 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:44 Download gff for BO19915.complete
Subject Subject Range Query Range Percent Splice Strand
CG33332-RA 79..1125 17..1065 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:44 Download gff for BO19915.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14887850..14888734 17..901 100 -> Plus
3R 14888795..14888956 902..1065 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:24 Download gff for BO19915.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10713572..10714456 17..901 100 -> Plus
arm_3R 10714517..10714678 902..1065 98   Plus

BO19915.pep Sequence

Translation from 16 to 1081

> BO19915.pep
MSSDDNSSDSNSSSDERQRKRKLKKHSKDVDKSKKKKSKKHKKEKRRHKE
KKRSKHEEEPPVPYTQPPHLINASPPDVATNNEDSFGPALPPHLRKTQQP
ELPEQSQPAPQPQAMIGPVLPSNLTREKSPTKEAEAEDDDDLAGTFGPLP
NASQVALEERALALKLAALEGGGLGTSTDQDVREEWMLELPDVGLKSGLA
ALSNMKRTFYQGKERPDFSDRSSWTKTPQSEADAAASGPKSLSSKELEQM
AQVKYEQQRDDEQESMAKRHKKKHKREESLVELHQKKLRKEQREKEKELA
ASGSKPERRPFSRDVDLKLNKIDKNQTKQIVDKAKILNTKFSRGQAKYLA
SFLDH

BO19915.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:06:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG33332-PA 349 CG33332-PA 1..349 1..349 1792 100 Plus