BO19918.complete Sequence
1012 bp assembled on 2009-05-13
GenBank Submission: KX798898
> BO19918.complete
GAAGTTATCAGTCGACATGCTAGCGGTGAACCAGACGAAGAACACCCTAC
TCGATGGAGCCTCCATTGAGGAAGAGCCGTACACAACTCCGCAGGAAAGC
GAGGATTTCTTTGAGAGTCTAGACAAACCGTCGAGGGAGCCAACACAACT
GGCACCCAGAAACACCTTCATCCGCGCCGGTGTGTTGACCACAGTGAGAG
GTTCCGCCTACATGGAGTATGGTAACACCAAGGTTCTGGCCATTGTGGCC
CCGCCAAAGGAGCTAATCCGCGCCAGCGCACGCAGAATGAACATGGGTGT
TCTGAATTGCTATGTGAATTTTGCGGCCTTCAGCACAGGGGATCTAGATT
CGGTGCCGGAACGGGAACGCCACCTGAGCAGCATGCTGACCAAGGCCATG
GAGCCGGTGGTGTGCCGCACGGAGTTCCTTAACTTTCAGCTGGACATACG
GGTGCTTATTCTCGACGATGACGGCTGCCTGCTCAGCACTGCCATCAATT
GCTGCGGAGTCGCTTTGGTGGAGTGCGGCATTTCCACTTACGACTTAATT
ACGGCCTCCACAGCTTGTATCTATCGGGATCACGTCTTCCTGAATCCCAG
TGCCAAGGTTGAGGAGCTGCTCTGGAAGCATCGCAACAGCAGCACCGATA
GCACAACCAGCCCATCATCCGCCCAGGAGCACGGCCTGATCATTACCGCC
AGCATGGATACCTTTGAACAGATCGCCCAGTGCCAGCAGTGCGGATATCT
CAGTCCAGCCACCTATGTAAAGCTGCTGGATTACACCCTGGCCATTAACA
AGTCCCTGAGAGAACTAGTCAAAGGCGTGCTCACGAAGCGGGTGAAGGAG
CAGCACGAACTAGATCTACGCGAGAAAGCCGAGACCGCTCTAGAAGATCA
GCGTTTGGAGGAAATAATCGAGAAGCTAAAGAAGCAAGGACCAGAGGAGT
TTATACAATCGAACATCCGGGAGGATCCCTATGTAAAGAGGCAGGCAAGC
TTTCTAGACCAT
BO19918.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:55:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mtr3-RA | 981 | CG8025-PA | 1..978 | 17..994 | 4890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:55:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mtr3-RA | 1253 | CG8025-RA | 87..1064 | 17..994 | 4890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:55:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19912594..19913420 | 994..168 | 4135 | 100 | Minus |
| 3L | 28110227 | 3L | 19913479..19913629 | 167..17 | 755 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:55:51 has no hits.
BO19918.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:29 Download gff for
BO19918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mtr3-RA | 67..1044 | 17..996 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:34:33 Download gff for
BO19918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mtr3-RA | 87..1064 | 17..996 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:40:40 Download gff for
BO19918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mtr3-RA | 87..1064 | 17..996 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:40:40 Download gff for
BO19918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19912592..19913420 | 168..996 | 99 | <- | Minus |
| 3L | 19913479..19913629 | 17..167 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:34:33 Download gff for
BO19918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19906579..19906729 | 17..167 | 100 | | Minus |
| arm_3L | 19905692..19906520 | 168..996 | 99 | <- | Minus |
BO19918.pep Sequence
Translation from 16 to 1012
> BO19918.pep
MLAVNQTKNTLLDGASIEEEPYTTPQESEDFFESLDKPSREPTQLAPRNT
FIRAGVLTTVRGSAYMEYGNTKVLAIVAPPKELIRASARRMNMGVLNCYV
NFAAFSTGDLDSVPERERHLSSMLTKAMEPVVCRTEFLNFQLDIRVLILD
DDGCLLSTAINCCGVALVECGISTYDLITASTACIYRDHVFLNPSAKVEE
LLWKHRNSSTDSTTSPSSAQEHGLIITASMDTFEQIAQCQQCGYLSPATY
VKLLDYTLAINKSLRELVKGVLTKRVKEQHELDLREKAETALEDQRLEEI
IEKLKKQGPEEFIQSNIREDPYVKRQASFLDH
BO19918.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:19:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mtr3-PA | 326 | CG8025-PA | 1..326 | 1..326 | 1666 | 100 | Plus |
| Ski6-PB | 246 | CG15481-PB | 11..176 | 33..201 | 191 | 31.4 | Plus |
| Ski6-PA | 246 | CG15481-PA | 11..176 | 33..201 | 191 | 31.4 | Plus |
