BO19930.complete Sequence
820 bp assembled on 2009-05-13
GenBank Submission: KX796183
> BO19930.complete
GAAGTTATCAGTCGACATGCACAGATTAGTGGTTCTTTTAGTTTGCCTGG
CTGTGGGTTCCGCCTGTGCTGGCACAGTCGGGGTCTCCAATGGTGATCCC
TTCGAGCGCGAAGGTCGCATTGTCGGCGGCGAGGATACAACAATCGGAGC
GCATCCCTACCAGGTTTCCCTGCAGACCAAGAGTGGCTCCCACTTCTGTG
GTGGTAGTTTGATCAACGAAGATACTGTTGTCACGGCGGCCCACTGTCTG
GTGGGAAGGAAGGTCTCCAAGGTGTTCGTGCGTCTCGGTTCCACGCTCTA
CAATGAGGGTGGAATTGTGGTTGCTGTCCGGGAGTTGGCATACAATGAGG
ACTATAACTCGAAGACCATGGAGTACGACGTGGGCATACTGAAGCTGGAC
GAGAAGGTAAAGGAAACCGAAAATATTCGATATATCGAACTGGCCACGGA
AACGCCGCCCACTGGCACCACCGCTGTGGTCACCGGCTGGGGTTCCAAGT
GCTACTTCTGGTGCATGACACTGCCCAAGACGCTCCAGGAGGTCTATGTC
AACATTGTGGACTGGAAGACGTGCGCTTCGGATGAGTACAAGTACGGAGA
GATCATCTACGATAGCATGGTGTGTGCCTATGAAAAGAAGAAGGACGCTT
GCCAAGGAGATTCCGGTGGTCCTCTGGCGGTCGGTAACACTCTGGTGGGA
ATCGTGTCCTGGGGATATGCCTGTGCCTCGAACCTACTGCCCGGTGTTTA
CTCCGATGTGCCCGCTTTGCGAAAGTGGATCCTGAATGCAAGCGAAACTT
TGGCAAGCTTTCTAGACCAT
BO19930.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:57:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| thetaTry-RA | 789 | CG12385-PA | 1..786 | 17..802 | 3930 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:57:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| thetaTry-RA | 1047 | CG12385-RA | 19..804 | 17..802 | 3930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:57:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11341957..11342742 | 802..17 | 3930 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:57:40 has no hits.
BO19930.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:24 Download gff for
BO19930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thetaTry-RA | 15..800 | 17..804 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:03:18 Download gff for
BO19930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thetaTry-RA | 19..804 | 17..804 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:56 Download gff for
BO19930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thetaTry-RA | 19..804 | 17..804 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:56 Download gff for
BO19930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11341955..11342742 | 17..804 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:03:18 Download gff for
BO19930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7229460..7230247 | 17..804 | 99 | | Minus |
BO19930.pep Sequence
Translation from 16 to 820
> BO19930.pep
MHRLVVLLVCLAVGSACAGTVGVSNGDPFEREGRIVGGEDTTIGAHPYQV
SLQTKSGSHFCGGSLINEDTVVTAAHCLVGRKVSKVFVRLGSTLYNEGGI
VVAVRELAYNEDYNSKTMEYDVGILKLDEKVKETENIRYIELATETPPTG
TTAVVTGWGSKCYFWCMTLPKTLQEVYVNIVDWKTCASDEYKYGEIIYDS
MVCAYEKKKDACQGDSGGPLAVGNTLVGIVSWGYACASNLLPGVYSDVPA
LRKWILNASETLASFLDH
BO19930.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:18:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| thetaTry-PA | 262 | CG12385-PA | 1..262 | 1..262 | 1390 | 100 | Plus |
| CG17571-PB | 258 | CG17571-PB | 1..258 | 1..262 | 666 | 51.9 | Plus |
| CG17571-PA | 258 | CG17571-PA | 1..258 | 1..262 | 666 | 51.9 | Plus |
| epsilonTry-PA | 256 | CG18681-PA | 1..254 | 1..260 | 579 | 47.3 | Plus |
| alphaTry-PA | 256 | CG18444-PA | 2..256 | 4..262 | 567 | 44.8 | Plus |
