BO19941.complete Sequence
745 bp assembled on 2012-04-25
GenBank Submission: KX796092
> BO19941.complete
GAAGTTATCAGTCGACATGGGATTTGGTAAACCTCGTGGCGGCGGTGGCG
GCGGCGGAAGAGGCTTCGGTGGAGGCGGAGGCGGAGGAGGACGAGGATTT
GGTGGAGGTGGAGGTGGACGAGGAGGTGGCGGAGGACGCGGAGGTGGCGG
CGGATTCGGTCGAGGTGGAGGTGGACGTGGTGGCGGCCGTGGAGCCTTCG
ACACTGGTCCACCAGAGAGAGTCATCCCCTTGGGCAACTATGTTTACTCC
TGCCAAAACGACCTTGTGTGCAAAGTTGATATTCAGGATGTTCCCTACTT
CAACGCGCCCATTTTCCTTGAAAACAAGGAGCAAGTAGGCAAAATCGACG
AAATCTTTGGAACAGTTCGGGACTACAGCGTGTCCATCAAGCTGTCGGAC
AACGTCTACGCCAACAGCTTCAAGCCAAATCAGAAACTGTTTATCGACCC
TGGAAAGCTGTTACCCATCGCCAGATTTCTGCCGAAACCTCCACAACCAA
AAGGCGCCAAGAAAGCCTTCACAAATAACCGAGGTGGAGGCGGCGGTGGC
GGTGGATTTGGAGGCCGAGGTGGCGGCCGCGGAGGAGGTGGTCGCGGTGG
TGGCGGCGGACGAGGTGGAGGCGGATTCCGAGGAGGTGCTGGTCGCAATG
GAGGAGGTGGCGGCGGCGGCGGTTTTAACAGAGGACGAGGAGGCGGTGGC
GGCGGCGGCGGTGGTCGGGGTCGGTGGGCAAGCTTTCTAGACCAT
BO19941.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:28:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4038-RA | 714 | CG4038-PA | 1..711 | 17..727 | 3555 | 100 | Plus |
| Fib-RA | 1035 | CG9888-PA | 127..203 | 533..609 | 190 | 83.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:28:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4038-RA | 957 | CG4038-RA | 75..785 | 17..727 | 3555 | 100 | Plus |
| Fib-RA | 1318 | CG9888-RA | 258..334 | 533..609 | 190 | 83.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:27:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21096325..21096708 | 589..206 | 1920 | 100 | Minus |
| 2R | 25286936 | 2R | 21097040..21097231 | 208..17 | 960 | 100 | Minus |
| 2R | 25286936 | 2R | 21096130..21096271 | 727..586 | 710 | 100 | Minus |
| 2R | 25286936 | 2R | 23074274..23074350 | 609..533 | 190 | 83.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:28:00 has no hits.
BO19941.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 18:28:37 Download gff for
BO19941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4038-RA | 73..783 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:35 Download gff for
BO19941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4038-RA | 75..785 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:04:51 Download gff for
BO19941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4038-RA | 75..785 | 17..729 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:04:51 Download gff for
BO19941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21096128..21096269 | 588..729 | 98 | <- | Minus |
| 2R | 21096327..21096707 | 207..587 | 100 | <- | Minus |
| 2R | 21097042..21097231 | 17..206 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:35 Download gff for
BO19941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16983633..16983774 | 588..729 | 98 | <- | Minus |
| arm_2R | 16983832..16984212 | 207..587 | 100 | <- | Minus |
| arm_2R | 16984547..16984736 | 17..206 | 100 | | Minus |
BO19941.pep Sequence
Translation from 16 to 745
> BO19941.pep
MGFGKPRGGGGGGGRGFGGGGGGGGRGFGGGGGGRGGGGGRGGGGGFGRG
GGGRGGGRGAFDTGPPERVIPLGNYVYSCQNDLVCKVDIQDVPYFNAPIF
LENKEQVGKIDEIFGTVRDYSVSIKLSDNVYANSFKPNQKLFIDPGKLLP
IARFLPKPPQPKGAKKAFTNNRGGGGGGGGFGGRGGGRGGGGRGGGGGRG
GGGFRGGAGRNGGGGGGGGFNRGRGGGGGGGGGRGRWASFLDH
BO19941.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:24:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4038-PA | 237 | CG4038-PA | 1..237 | 1..237 | 1330 | 100 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 46..298 | 8..235 | 352 | 37.6 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 46..298 | 8..235 | 352 | 37.6 | Plus |
| caz-PC | 384 | CG3606-PC | 32..255 | 2..233 | 317 | 38 | Plus |
| caz-PB | 399 | CG3606-PB | 47..270 | 2..233 | 317 | 38 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 323..392 | 163..235 | 215 | 60.3 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 323..392 | 163..235 | 215 | 60.3 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 333..423 | 158..235 | 207 | 54.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 333..423 | 158..235 | 207 | 54.9 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 309..385 | 173..240 | 206 | 57.1 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 377..458 | 173..235 | 206 | 55.4 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 309..385 | 173..240 | 206 | 57.1 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 377..458 | 173..235 | 206 | 55.4 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 443..507 | 173..235 | 205 | 68.2 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 398..487 | 158..236 | 205 | 53.8 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 301..360 | 174..235 | 204 | 66.1 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 301..360 | 174..235 | 204 | 66.1 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 443..517 | 173..236 | 203 | 59.7 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 244..316 | 4..59 | 202 | 57.5 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 244..316 | 4..59 | 202 | 57.5 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 445..518 | 172..235 | 199 | 59.5 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 402..476 | 174..236 | 197 | 58.7 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 398..500 | 158..240 | 196 | 48.5 | Plus |
| caz-PC | 384 | CG3606-PC | 295..367 | 174..234 | 196 | 59.5 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 26..113 | 158..233 | 195 | 53.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 26..113 | 158..233 | 195 | 53.9 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 328..397 | 4..60 | 193 | 59.2 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 328..397 | 4..60 | 193 | 59.2 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 237..298 | 2..59 | 190 | 62.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 237..298 | 2..59 | 190 | 62.9 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 23..114 | 153..232 | 185 | 53.7 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 262..336 | 2..66 | 185 | 51.3 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 23..114 | 153..232 | 185 | 53.7 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 262..336 | 2..66 | 185 | 51.3 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 399..463 | 4..60 | 184 | 63.6 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 399..463 | 4..60 | 184 | 63.6 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 465..528 | 174..235 | 182 | 60.9 | Plus |
| caz-PC | 384 | CG3606-PC | 243..352 | 171..243 | 181 | 41.8 | Plus |
| caz-PC | 384 | CG3606-PC | 295..374 | 10..68 | 181 | 55 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 435..513 | 4..65 | 179 | 55.7 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 473..546 | 173..235 | 179 | 55.3 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 234..300 | 6..65 | 178 | 61.2 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 299..360 | 2..59 | 178 | 62.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 234..300 | 6..65 | 178 | 61.2 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 299..360 | 2..59 | 178 | 62.9 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 295..371 | 4..66 | 177 | 54.5 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 465..535 | 173..235 | 177 | 56.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 295..371 | 4..66 | 177 | 54.5 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 417..491 | 2..66 | 177 | 54.7 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 405..475 | 2..59 | 176 | 56.3 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 346..412 | 2..60 | 175 | 58.2 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 346..412 | 2..60 | 175 | 58.2 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 369..434 | 4..66 | 173 | 58.2 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 369..434 | 4..66 | 173 | 58.2 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 417..482 | 2..60 | 172 | 58 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 435..524 | 4..65 | 172 | 51.1 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 307..395 | 2..66 | 171 | 48.3 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 307..395 | 2..66 | 171 | 48.3 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 375..461 | 2..66 | 170 | 49.4 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 452..517 | 173..235 | 170 | 58.8 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 473..542 | 163..235 | 170 | 55.4 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 375..461 | 2..66 | 170 | 49.4 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 484..553 | 163..235 | 170 | 55.4 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 366..433 | 4..60 | 163 | 58.8 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 432..493 | 4..60 | 163 | 60.3 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 366..433 | 4..60 | 163 | 58.8 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 478..536 | 4..59 | 162 | 57.6 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 489..547 | 4..59 | 162 | 57.6 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 471..526 | 2..56 | 161 | 60.7 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 462..515 | 4..56 | 158 | 61.1 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 484..542 | 4..59 | 156 | 57.6 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 495..553 | 4..59 | 156 | 57.6 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 465..549 | 8..76 | 153 | 47.1 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 476..547 | 162..234 | 151 | 47.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 487..558 | 162..234 | 151 | 47.9 | Plus |
| caz-PC | 384 | CG3606-PC | 315..378 | 170..233 | 149 | 51.6 | Plus |
