BO19951.complete Sequence
1027 bp assembled on 2010-11-19
GenBank Submission: KX797210
> BO19951.complete
GAAGTTATCAGTCGACATGGGTTTGACGCGCGTGCTGGTGAAGGATGGCG
GTTTCGGCACCCAGATGACCGTCCATGTGGGTGACTCTGTGGATGGGGAT
CCGCTATGGAGTGCCCGCTTCAATGCCACCAATCCGGCGGCCATTATCAG
CACCCACCTGGACTTTTTGCAGAATGGTGCCGATATCATTTTGACCAACA
CCTACCAGTCCAGTGTCGATGGTTACATGGAGTACCTGGAGCTGGACGAG
GAGCAGAGCATCGAGCTGATAAAGAACACGGTCCGCCTGGCCCACATCGC
CAAGGAACGCTATCTCACCGAGTGCTATCAGGCGCAGCTGTCGGTGCAGG
AGGGATACCCTTTGATCATTGCCTCCATTGGACCCTTTGGGGCCCACCTG
CACGATGGCTCCGAGTACACCGGTAGCTATGCCGACTTTGTGCCGGCCAA
GGAGATTACGGACTGGCATCGCGTGAGGATCGAAGCGTGCTTGGAGGCTG
GTGTGGATGCGCTGGCCATCGAGACGATTCCCTGTCAAATGGAGGCGGAG
GCCCTGGTGGAGATGCTGTGCGATGATTATCCGGATGTGAAGTTCTGGGT
GGCCTTCCAGTGCAAGGATGAGAATACCCTGGCGCATGGAGAAACCTTTG
CGGACGCGGCGAATGCTATTTGGGACCTCTTGGCTGAACGAAATGCCCAG
GATAAGTGCCTGGCCATCGGAGTAAATTGTGTGCATCCGAAGTTTGTGAC
CCCGCTCTTTAAGAGTTTGAATGGTGACCGCGAAGTGGGTGAGCAGATAC
CGTTGGTGGTGTACCCCAATAGCGGAGAGGTATACGACGTGGTCAACGGC
TGGCAGGGAAGGGAGCACTGTGTGCCCTTGGCGAACTACGTTCCGGAGTG
GGCGCAACTGGGGGCCAAGGTCATTGGGGGATGCTGTCGCACTTATGCGA
GGGATATACGCCACATCGGGGAGGCCATTCGCGACTGGAACAAACTGAAG
AAGCTCTCAGCAAGCTTTCTAGACCAT
BO19951.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:35:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10621-RC | 996 | CG10621-PC | 1..993 | 17..1009 | 4965 | 100 | Plus |
CG10621-RB | 996 | CG10621-PB | 1..993 | 17..1009 | 4965 | 100 | Plus |
CG10621-RA | 996 | CG10621-PA | 1..993 | 17..1009 | 4965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10621-RC | 1419 | CG10621-RC | 290..1283 | 16..1009 | 4970 | 100 | Plus |
CG10621-RB | 1519 | CG10621-RB | 390..1383 | 16..1009 | 4970 | 100 | Plus |
CG10621-RA | 1302 | CG10621-RA | 173..1166 | 16..1009 | 4970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18952342..18952998 | 1009..353 | 3285 | 100 | Minus |
2L | 23513712 | 2L | 18953157..18953337 | 354..174 | 905 | 100 | Minus |
2L | 23513712 | 2L | 18953404..18953561 | 173..16 | 790 | 100 | Minus |
2L | 23513712 | 2L | 18956799..18956949 | 239..89 | 185 | 74.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:35:12 has no hits.
BO19951.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-19 09:48:53 Download gff for
BO19951.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10621-RA | 164..1156 | 17..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:33:16 Download gff for
BO19951.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10621-RA | 174..1166 | 17..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:14 Download gff for
BO19951.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10621-RA | 174..1166 | 17..1011 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:14 Download gff for
BO19951.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18952340..18952997 | 354..1011 | 99 | <- | Minus |
2L | 18953158..18953337 | 174..353 | 100 | <- | Minus |
2L | 18953404..18953560 | 17..173 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:33:16 Download gff for
BO19951.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18952340..18952997 | 354..1011 | 99 | <- | Minus |
arm_2L | 18953158..18953337 | 174..353 | 100 | <- | Minus |
arm_2L | 18953404..18953560 | 17..173 | 100 | | Minus |
BO19951.pep Sequence
Translation from 16 to 1027
> BO19951.pep
MGLTRVLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDF
LQNGADIILTNTYQSSVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYL
TECYQAQLSVQEGYPLIIASIGPFGAHLHDGSEYTGSYADFVPAKEITDW
HRVRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVAFQCK
DENTLAHGETFADAANAIWDLLAERNAQDKCLAIGVNCVHPKFVTPLFKS
LNGDREVGEQIPLVVYPNSGEVYDVVNGWQGREHCVPLANYVPEWAQLGA
KVIGGCCRTYARDIRHIGEAIRDWNKLKKLSASFLDH
BO19951.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:46:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10621-PC | 331 | CG10621-PC | 1..331 | 1..331 | 1770 | 100 | Plus |
CG10621-PB | 331 | CG10621-PB | 1..331 | 1..331 | 1770 | 100 | Plus |
CG10621-PA | 331 | CG10621-PA | 1..331 | 1..331 | 1770 | 100 | Plus |
CG10623-PC | 331 | CG10623-PC | 14..328 | 6..325 | 915 | 53.7 | Plus |
CG10623-PB | 331 | CG10623-PB | 14..328 | 6..325 | 915 | 53.7 | Plus |