BO19954.complete Sequence
1237 bp assembled on 2009-07-17
GenBank Submission: KX798133
> BO19954.complete
GAAGTTATCAGTCGACATGATGATCGAGTGGTGGCTGCCATGGGTGTGCC
TCTTGCCGCTCATGCAGGCGGATCCTGTTGCTCCCCAGCTGGATCTTGGT
GTGAAGGACTTCCAGCTGGAGCTTCTGCGCGAGTTAAGCGACCTGGTGCA
ACAGCGGATTGAACCGAGTCTCAACGACTACCTGGATCGTCTAGGACGCA
TTCCTCGGAATGCCAACTACACCGAAGAGATGAGTGCAGCTCGCGCAACA
CCAAAGCTTCAATTGAAGGTGACGCTCATCAAGCAGCTGCTCGACGTGCG
TCCGCACCTGGACACGGATATGGAGTACACCATTGTGCTGCGCAACCTGG
TCTTTCTGAACCGAGTCAGATCCACGCTGAGGGCTGCCGAGGAGACTAGC
ACACAAGAGATCCGAATGATGCGCATGCACCGCCTCTGCCAGCAACTTGA
CCGACCGGCTCCTCATCGCGGCAGTCGCCTGATCAACGAACAGACAGTCG
GGGCGGCATTGGGGCAACTCAATCTGACCAAAAAGGAGGTGAACTCCACC
GGCTTGGATCTCAATGAGTTCGGGGCGCAGCTGTACGAGCGGGTCAAGTT
ATCCGGCGCCGAAATCATCGACAACTACCTGCACATACTGCGTTCCCTGC
TGCAGGACATCATCGACGGTGACCATGCTGATCTGGCCGGGAGCAGTGCC
AAGCTGGACAAGATGCAGCAGCAGCTGGACGTCATGCTTGCCACGGAGGA
CTTCTTCGAGAAACGTCAACGGGTGTATGCGTACCTGGAGCACCACTTGC
GCACCGATTACGAGGAGATGCGGGACACATCGAGCAGCGAGCACATCACC
GAACATCTTCTCGCCCAGCTGAAGACCAAGGGACTGGACCTGTTCGTCAT
CTTTCTTTTTAGCAATTTTGAATTCCTAGACCTGGTGCACGAGCACTGGG
AGCAGCTGTTGCCACAGTCACCCAGTTTGCTATACGACGAGACCGCACGC
CAATTGTACGATCTGCAGCAGCTGTATCAGGTCTTCAAGCTGGACACGGA
GTGCGAGGCCAAGTACACGGCCTACTCGGACGCACTGCGTCGCTTGCACG
AGCGGACCGTGGAGCAGGGTCAGCGCAACCGGCACATCTTTGAGCTGCTC
CACAACGCGGCACAAAGCGTCGGCACGGTTACCTTCAACATGATCCGGGC
CAAGTGCAATGAGCTAAGAGCAAGCTTTCTAGACCAT
BO19954.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:22:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42369-RA | 1206 | CG42369-PA | 1..1203 | 17..1219 | 6015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:22:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42369-RA | 1397 | CG42369-RA | 157..1359 | 17..1219 | 6015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:22:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6395891..6397093 | 1219..17 | 6015 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:22:40 has no hits.
BO19954.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-27 12:13:26 Download gff for
BO19954.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42369-RA | 157..1359 | 17..1221 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:13:27 Download gff for
BO19954.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42369-RA | 157..1359 | 17..1221 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:09:25 Download gff for
BO19954.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42369-RA | 157..1359 | 17..1221 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:09:25 Download gff for
BO19954.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6395888..6397093 | 17..1221 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:13:27 Download gff for
BO19954.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6395888..6397093 | 17..1221 | 99 | | Minus |
BO19954.pep Sequence
Translation from 16 to 1237
> BO19954.pep
MMIEWWLPWVCLLPLMQADPVAPQLDLGVKDFQLELLRELSDLVQQRIEP
SLNDYLDRLGRIPRNANYTEEMSAARATPKLQLKVTLIKQLLDVRPHLDT
DMEYTIVLRNLVFLNRVRSTLRAAEETSTQEIRMMRMHRLCQQLDRPAPH
RGSRLINEQTVGAALGQLNLTKKEVNSTGLDLNEFGAQLYERVKLSGAEI
IDNYLHILRSLLQDIIDGDHADLAGSSAKLDKMQQQLDVMLATEDFFEKR
QRVYAYLEHHLRTDYEEMRDTSSSEHITEHLLAQLKTKGLDLFVIFLFSN
FEFLDLVHEHWEQLLPQSPSLLYDETARQLYDLQQLYQVFKLDTECEAKY
TAYSDALRRLHERTVEQGQRNRHIFELLHNAAQSVGTVTFNMIRAKCNEL
RASFLDH
BO19954.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:50:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42369-PA | 401 | CG9511-PA | 1..401 | 1..401 | 2059 | 100 | Plus |