BO19956.complete Sequence
1165 bp assembled on 2009-05-13
GenBank Submission: KX799229
> BO19956.complete
GAAGTTATCAGTCGACATGAAATTCATCTGGGCCCTGATTTTGGTGCTCG
GTTCCATTGCAGCGAACGCTGAGCGTGATAATTACTGCGAAAGGAACGAG
ACGATACGAGCCACAGTGCCAGTGACCAAACAGCGGATCATAGTAAAGCA
GCCATCCAAGTGGAAGATCTGGAAGAAGACTGAGAAGATCACAGAGATCT
ACGATTCAGAGGAGGAACAAGTCACCCACAGGTTGGTTAGGGAGTGCTGC
CCCGGCTACTTGCAGGTGGAGTCCGGCTTGTGTGAGCCCATCTGCAGTCG
GGGCTGTCCCGCCCACGCCAGTTGTGCCGCTCCAGATCGCTGTGAGTGCA
TTTCCGGCTACGTGTCAGCCAGAAATCACCAGGATGGCAGCCACTACTGT
GAACCCATCTGCGAGACCCCATGTCCTGCGGGTGCTCAGTGCGTAACGCC
CAATACATGTGCCTGTCGCGACGGGTACACCCAATTGCAGCCAACTGACG
ATGGTGTGAGTGGTGGATGTGCCCCAGTTTGCCGGGTGGGCGATGGCTGT
GCCAATGGCAAGTGCATCGATGTGGACCGCTGTGCCTGCAACTCCGGATA
TCGGTGGGATAAGGCCGAAGAGAGGTGTATCGAGCTCAGTGCAGAGTCAA
TCTCTGAGGAACTGGAGACCACCGAGGACAATACGGATTCGCCGAGCACC
AGTTCAACAGCAGTATTCACGGCCACCCACTGTCCGGATGACTTTGTCCT
GTTCCGCGGCGAATGCCGCGAGAAGCAATTCGACAGCAATGATGTGGGTT
GCCTTAAATCCGGCTGTGGTCCGCATCAAACATGCCTGGACTCCGGTGTA
TGTCAGTGCTCCGATGGCTATGTGCCGGAGGAGAGTGGCGAAGCAACTGG
AGTGCTCAGCTGTCGGCGCACTTTGCTCGACCAAATTCTCGGGCTGAACG
AAGCTATCGACGATGACGATGAGCTGAATCCCTGGACCATACCCATCATT
GGTGTTGCCTGTGGATTCCTGTTTGTTCTGCTCATTGTGGGTCTCCTCGG
TGGTAGACGATATCGCCAGGAGCGGGCTGCTTTGGCCAACAAGGAGATGG
AGTGCCAGTATTCGCAGAAGACAGTGGATGTGGACGAGTGGGTGCCAGCA
AGCTTTCTAGACCAT
BO19956.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:16:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NimC4-RA | 1134 | CG16876-PA | 1..1131 | 17..1147 | 5655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:16:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NimC4-RA | 1282 | CG16876-RA | 50..1180 | 17..1147 | 5655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:16:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14047631..14048761 | 17..1147 | 5655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:16:20 has no hits.
BO19956.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:03 Download gff for
BO19956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nimC4-RA | 48..1178 | 17..1149 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:05:51 Download gff for
BO19956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NimC4-RA | 50..1180 | 17..1149 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:27 Download gff for
BO19956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NimC4-RA | 50..1180 | 17..1149 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:27 Download gff for
BO19956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14047631..14048761 | 17..1149 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:05:51 Download gff for
BO19956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14047631..14048761 | 17..1149 | 99 | | Plus |
BO19956.pep Sequence
Translation from 16 to 1165
> BO19956.pep
MKFIWALILVLGSIAANAERDNYCERNETIRATVPVTKQRIIVKQPSKWK
IWKKTEKITEIYDSEEEQVTHRLVRECCPGYLQVESGLCEPICSRGCPAH
ASCAAPDRCECISGYVSARNHQDGSHYCEPICETPCPAGAQCVTPNTCAC
RDGYTQLQPTDDGVSGGCAPVCRVGDGCANGKCIDVDRCACNSGYRWDKA
EERCIELSAESISEELETTEDNTDSPSTSSTAVFTATHCPDDFVLFRGEC
REKQFDSNDVGCLKSGCGPHQTCLDSGVCQCSDGYVPEESGEATGVLSCR
RTLLDQILGLNEAIDDDDELNPWTIPIIGVACGFLFVLLIVGLLGGRRYR
QERAALANKEMECQYSQKTVDVDEWVPASFLDH
BO19956.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:57:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NimC4-PA | 377 | CG16876-PA | 1..377 | 1..377 | 2078 | 100 | Plus |
| NimC2-PC | 701 | CG18146-PC | 65..291 | 77..300 | 290 | 29.3 | Plus |
| NimC2-PB | 701 | CG18146-PB | 65..291 | 77..300 | 290 | 29.3 | Plus |
| NimC3-PB | 224 | CG16880-PB | 10..224 | 7..228 | 277 | 30.6 | Plus |
| eater-PC | 1074 | CG6124-PC | 810..1071 | 77..372 | 276 | 28.2 | Plus |
| NimC2-PC | 701 | CG18146-PC | 306..483 | 76..285 | 225 | 29.4 | Plus |
| NimC2-PB | 701 | CG18146-PB | 306..483 | 76..285 | 225 | 29.4 | Plus |
| NimC2-PC | 701 | CG18146-PC | 201..418 | 77..290 | 215 | 28.2 | Plus |
| NimC2-PB | 701 | CG18146-PB | 201..418 | 77..290 | 215 | 28.2 | Plus |
| NimC2-PC | 701 | CG18146-PC | 409..528 | 77..205 | 210 | 34.8 | Plus |
| NimC2-PB | 701 | CG18146-PB | 409..528 | 77..205 | 210 | 34.8 | Plus |
| NimC2-PC | 701 | CG18146-PC | 236..450 | 77..286 | 201 | 26.4 | Plus |
| NimC2-PB | 701 | CG18146-PB | 236..450 | 77..286 | 201 | 26.4 | Plus |
| NimC2-PC | 701 | CG18146-PC | 476..590 | 74..197 | 164 | 29.4 | Plus |
| NimC2-PB | 701 | CG18146-PB | 476..590 | 74..197 | 164 | 29.4 | Plus |
| NimC2-PC | 701 | CG18146-PC | 547..619 | 76..149 | 155 | 41.6 | Plus |
| NimC2-PB | 701 | CG18146-PB | 547..619 | 76..149 | 155 | 41.6 | Plus |
