BO19959.complete Sequence
955 bp assembled on 2009-05-13
GenBank Submission: KX796266
> BO19959.complete
GAAGTTATCAGTCGACATGTTCAAATTTAATTTTGATGTGAAGGCGGAAT
CCTCGGAAGATCCAGAGGCCGTTAAAAATGATATTTTTAGCAAGCAGGAA
AATTCAGAAGAACGTGAGTCGGGTATCACAAAGGATATAGATTGGTACAA
TTCGGAGAAAGTACAACCACTGGATAACCTAATTTCGGCAATGGATTTCT
ATGAGCTTAACGCCAAGGAAATGGAGGTGGGAAAGATGACGATAAAACAT
CTTGTGGCCGGGTTTCTGCTGGAGGATTTAAAGGAGCAATCCCACTTGGT
AAACCTGGATCTCAGGAAGTCTGAGGAAAATCATTCAGATCTGATTTCCG
GTGTCTACGAGGGCGGTGCTAAAATATGGGAATGCACTGAAGATCTTCTA
CTATATCTATCCGAAAAGTACGAGGACTCATTCTGGAAGGAGAAAAGAGT
CCTAGATTTGGGATGTGGCTGCGGATTGCTGGGTATATATGCTATGAAAC
ACGGCGCACGGGTGGATTTTCAGGACTACAACAAAGATGTGCTGGAATAC
ATAACATATCCAAATATCCTGCTAAATTTGGACGACTCTTTATCTGAAGA
TGAAAAGCTGAAATTTTTAGACAACAGTACAACCTTATATTCTGGAGATT
GGTCTCATTTTGCTGAACTATCAAGGGATGTGGCGAAATACGATCTAATA
CTTACCTCTGAGACTATATACAATATTGCAAATCAGCAAAAGCTCTTGGA
TACCTTTGCTGGTCGCTTAAAATCCGATGGAGTCATTTTGGTTGCCGCAA
AATCTCATTATTTTGGAGTTGGTGGCGGCCTGGAACAGTTTTCAGAGAAC
ATTAGGCTGGGAAATGTTTTCCAAAGTGAGAGTGTTTGGCAGGCAGACGA
AAACTTAAAAAGAGGAATCTTGCAATTGAAATTTAAAGCAAGCTTTCTAG
ACCAT
BO19959.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:02:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17219-RA | 924 | CG17219-PA | 1..921 | 17..937 | 4605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:02:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17219-RA | 1253 | CG17219-RA | 108..1029 | 16..937 | 4610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:02:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3029419..3029932 | 16..529 | 2570 | 100 | Plus |
| 2L | 23513712 | 2L | 3029985..3030392 | 530..937 | 2040 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:02:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 832..880 | 897..945 | 110 | 69.4 | Plus |
| Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 871..919 | 897..945 | 110 | 69.4 | Plus |
BO19959.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:02 Download gff for
BO19959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17219-RA | 110..1025 | 22..939 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:06 Download gff for
BO19959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17219-RA | 114..1029 | 22..939 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:05:03 Download gff for
BO19959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17219-RA | 114..1029 | 22..939 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:05:03 Download gff for
BO19959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3029985..3030392 | 530..939 | 99 | | Plus |
| 2L | 3029425..3029932 | 22..529 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:06 Download gff for
BO19959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3029985..3030392 | 530..939 | 99 | | Plus |
| arm_2L | 3029425..3029932 | 22..529 | 100 | -> | Plus |
BO19959.pep Sequence
Translation from 16 to 955
> BO19959.pep
MFKFNFDVKAESSEDPEAVKNDIFSKQENSEERESGITKDIDWYNSEKVQ
PLDNLISAMDFYELNAKEMEVGKMTIKHLVAGFLLEDLKEQSHLVNLDLR
KSEENHSDLISGVYEGGAKIWECTEDLLLYLSEKYEDSFWKEKRVLDLGC
GCGLLGIYAMKHGARVDFQDYNKDVLEYITYPNILLNLDDSLSEDEKLKF
LDNSTTLYSGDWSHFAELSRDVAKYDLILTSETIYNIANQQKLLDTFAGR
LKSDGVILVAAKSHYFGVGGGLEQFSENIRLGNVFQSESVWQADENLKRG
ILQLKFKASFLDH
BO19959.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:57:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17219-PA | 307 | CG17219-PA | 1..307 | 1..307 | 1594 | 100 | Plus |
