BO19985.complete Sequence
1540 bp assembled on 2010-10-20
GenBank Submission: KX799386
> BO19985.complete
GAAGTTATCAGTCGACATGTCGCTGTTACTAACGTTGATCGCACTTCTAG
TGTCACTGCTTTTGTTCATGGCCCGCCGACGTCATGGATACTGGCAGAGG
CGGGGTATTCCGCACGATGTGCCCCATCCAATATACGGAAACATGAAGGA
CTGGCCCAAGAAGCGACACATTGCGATGATCTTCCGGGACTACTATACAA
AGTACAAACGTTCCGTTTATCCGTTTGCCGGGTTCTACTTCTTTTTCACC
CGGTCTGCTGTCATCACCGACTTGGAATTGGTCAAGAGGGTGCTGATCAA
GGACTTCAATCACTTTGAGAATCGAGGAATTTTCTACAATGAGATCGATG
ATCCGCTGTCGGCCACCTTGTTCAGCATCGAGGGTCAGAAGTGGCGTCAT
CTGAGGCACAAACTGACACCCACTTTTACGTCCGGCAAAATGAAGAACAT
GTTTCCGATTATTGTGAAGGTTGGGGAGGAAATGGAGAAGATTTTCAGTG
CTAAAACCACCACAGGTGAAGGTCAAGTTCTGGAAATTGTGGATCTGGTG
GCTCGATATACGGCTGACGTAATCGGTAATTGCGCCTTCGGTTTAAATTG
CAATAGTTTGCAAAACCCGAATGCAGAGTTTGTGACAATCGGAAAAAGGG
CGATCATAGAACGTCGTTATGGAGGACTATTGGATTTCCTGATATTCGGA
TTTCCCAAACTTTCCCGCCGCCTGCGGCTTAAACTAAACGTGCAGGATGT
TGAGGACTTTTACACTAGCATTGTTAGGAATACTATCGACTACCGATTGA
GGACCAACGAGAAGCGTCACGACTTCATGGACAGTTTAATCGAAATGTAC
GAGAAGGAGCAGGCCGGAAACACTGAGGATGGCCTGTCCTTCAACGAGAT
CTTGGCACAGGCCTTTATTTTCTTTGTGGCTGGCTTCGAGACCAGCTCGA
CGACCATGGGATTTGCCCTGTACGAGCTCGCCCTCGATCAGGATATTCAG
GATCAACTTAGGGCGGAGATCAACAATGTTCTGAGCAAACACAACAACGA
GTTTACCTACGAGGGAATCAAAGAGATGAAGTATCTGGAGCAGGTCGTCA
TGGAAACCCTTCGCAAGTATCCAGTTCTGGCGCATCTAACGCGAATGACC
CAGACAGATTTTTCGCCTGAAGATCCTAAATACTTTATTGCCAAGGGAAC
CACTGTTGTGATCCCAGCTCTTGGTATTCACTATGATCCGGAAATCTATC
CCGAACCGGAGAAGTTCAAGCCGGAGCGATTTACGGATGAGGCGATCGCC
GCGAGACCCTCGTGCACCTGGCTGCCGTTTGGAGAAGGTCCCCGGAACTG
CATCGGTCTTCGGTTTGGACTGATGCAGGCCTGCGTGGGATTGGCCTATC
TAATCCGAGGCTATAAGTTCAGTGTGTCCACAGAAACACAAATTCCCATG
AAGTTTGTCGTGAAAAGCATTCTTCTGTCTGCTGAGAATGGCATTCACCT
TAAAGTTGAGAAGCTTTCCAAAGCAAGCTTTCTAGACCAT
BO19985.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:20:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp6a23-RA | 1509 | CG10242-PA | 1..1506 | 17..1522 | 7530 | 100 | Plus |
Cyp6a17-RB | 1506 | CG10241-PB | 34..1503 | 53..1522 | 3075 | 80.6 | Plus |
Cyp6a17-RA | 1506 | CG10241-PA | 34..1503 | 53..1522 | 3075 | 80.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:20:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp6a23-RA | 1761 | CG10242-RA | 33..1538 | 17..1522 | 7530 | 100 | Plus |
Cyp6a17-RB | 1727 | CG10241-RB | 61..1530 | 53..1522 | 3075 | 80.6 | Plus |
Cyp6a17-RA | 1546 | CG10241-RA | 61..1530 | 53..1522 | 3075 | 80.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:20:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14875861..14876947 | 17..1103 | 5435 | 100 | Plus |
2R | 25286936 | 2R | 14877012..14877431 | 1103..1522 | 2100 | 100 | Plus |
2R | 25286936 | 2R | 14874013..14875063 | 53..1103 | 2015 | 79.4 | Plus |
2R | 25286936 | 2R | 14875123..14875542 | 1103..1522 | 1065 | 83.6 | Plus |
2R | 25286936 | 2R | 14882993..14883125 | 879..1011 | 260 | 79.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:20:34 has no hits.
BO19985.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-20 10:48:27 Download gff for
BO19985.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp6a23-RA | 29..1534 | 17..1524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:30:56 Download gff for
BO19985.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp6a23-RA | 33..1538 | 17..1524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:21 Download gff for
BO19985.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp6a23-RA | 33..1538 | 17..1524 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:21 Download gff for
BO19985.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14875861..14876947 | 17..1103 | 100 | -> | Plus |
2R | 14877013..14877431 | 1104..1524 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:30:56 Download gff for
BO19985.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10763366..10764452 | 17..1103 | 100 | -> | Plus |
arm_2R | 10764518..10764936 | 1104..1524 | 99 | | Plus |
BO19985.pep Sequence
Translation from 16 to 1540
> BO19985.pep
MSLLLTLIALLVSLLLFMARRRHGYWQRRGIPHDVPHPIYGNMKDWPKKR
HIAMIFRDYYTKYKRSVYPFAGFYFFFTRSAVITDLELVKRVLIKDFNHF
ENRGIFYNEIDDPLSATLFSIEGQKWRHLRHKLTPTFTSGKMKNMFPIIV
KVGEEMEKIFSAKTTTGEGQVLEIVDLVARYTADVIGNCAFGLNCNSLQN
PNAEFVTIGKRAIIERRYGGLLDFLIFGFPKLSRRLRLKLNVQDVEDFYT
SIVRNTIDYRLRTNEKRHDFMDSLIEMYEKEQAGNTEDGLSFNEILAQAF
IFFVAGFETSSTTMGFALYELALDQDIQDQLRAEINNVLSKHNNEFTYEG
IKEMKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIP
ALGIHYDPEIYPEPEKFKPERFTDEAIAARPSCTWLPFGEGPRNCIGLRF
GLMQACVGLAYLIRGYKFSVSTETQIPMKFVVKSILLSAENGIHLKVEKL
SKASFLDH
BO19985.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:41:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp6a23-PA | 502 | CG10242-PA | 1..502 | 1..502 | 2622 | 100 | Plus |
Cyp6a17-PB | 501 | CG10241-PB | 2..501 | 3..502 | 2283 | 84.4 | Plus |
Cyp6a17-PA | 501 | CG10241-PA | 2..501 | 3..502 | 2283 | 84.4 | Plus |
Cyp6a20-PB | 501 | CG10245-PB | 1..501 | 4..500 | 1460 | 54.8 | Plus |
Cyp6a19-PA | 503 | CG10243-PA | 1..500 | 1..500 | 1369 | 50.1 | Plus |