BO20412.complete Sequence
373 bp assembled on 2009-05-13
GenBank Submission: KX795284
> BO20412.complete
GAAGTTATCAGTCGACATGCACAACCGTTGCGGATCCATTTGGCTGCTGG
CGGCCGTCCTGCTGCTGCTGGCGCTCCTGCTTCCGCAGGCACTGCTGCCT
ACCGTCGATGCGGCCAGCGAACCCGTGTGCTCCTACCGCAACTCGGAGGA
TGAGACCATCTTTCTCAAGTATCTGCCGCTGCTGAGACGCGGACAGGACT
ACGTGGACTTCGGCAAGGATGGCAAGTGCCTCAAGCGGGCCATCTGCACG
GACACCTTCAAGACCATCGTGGAGGACTGTGGACAGCAGAAGGTCACCTG
CGGCAACAAGGATCGCTTCACCGGAGTTTTCCCTGCCTGCTGCCTCAAGT
GTCCCGCAAGCTTTCTAGACCAT
BO20412.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:27:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15201-RA | 342 | CG15201-PA | 1..339 | 17..355 | 1695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:27:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15201-RA | 489 | CG15201-RA | 34..372 | 17..355 | 1695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:27:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11144319..11144482 | 113..276 | 820 | 100 | Plus |
X | 23542271 | X | 11144153..11144249 | 17..113 | 485 | 100 | Plus |
X | 23542271 | X | 11144614..11144692 | 277..355 | 395 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 16:27:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1530..1602 | 97..28 | 114 | 65.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2394 | 97..27 | 109 | 63.4 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1064..1129 | 88..25 | 109 | 65.2 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1057..1168 | 148..38 | 107 | 57.5 | Minus |
BO20412.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:16 Download gff for
BO20412.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15201-RA | 34..372 | 17..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:21 Download gff for
BO20412.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15201-RA | 34..372 | 17..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:19:06 Download gff for
BO20412.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15201-RA | 34..372 | 17..357 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:19:06 Download gff for
BO20412.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11144153..11144249 | 17..113 | 100 | -> | Plus |
X | 11144320..11144482 | 114..276 | 100 | -> | Plus |
X | 11144614..11144692 | 277..357 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:21 Download gff for
BO20412.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11038186..11038282 | 17..113 | 100 | -> | Plus |
arm_X | 11038353..11038515 | 114..276 | 100 | -> | Plus |
arm_X | 11038647..11038725 | 277..357 | 97 | | Plus |
BO20412.pep Sequence
Translation from 16 to 373
> BO20412.pep
MHNRCGSIWLLAAVLLLLALLLPQALLPTVDAASEPVCSYRNSEDETIFL
KYLPLLRRGQDYVDFGKDGKCLKRAICTDTFKTIVEDCGQQKVTCGNKDR
FTGVFPACCLKCPASFLDH
BO20412.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:54:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15201-PA | 113 | CG15201-PA | 1..113 | 1..113 | 611 | 100 | Plus |