Clone BO20433 Report

Search the DGRC for BO20433

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:204
Well:33
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO20433.pep: Imported from assembly
Sequenced Size:364

Clone Sequence Records

BO20433.complete Sequence

364 bp assembled on 2009-05-13

> BO20433.complete
GAAGTTATCAGTCGACATGTTGAGTATATTTCGGTGTTTTTCATCTCATT
ACTGTGAGGGTGGCGGTCAGACAAATGCCTTTGTTTCAATGTCTGTCCTT
AACACAGCATTGGAATGCCGGGAATTTCGCCGAAAACGACATTTTTGTCT
GGCAGCCAACACGCCCCGAAATATGCAACATGTCTCCTCGTCCCGCCATC
CCTCCCTCCATTCCGTATCCACTTTTCTTCTTCTGTGGCGGAGGCTCCAC
CCAAGAGCACGCAATGTGGCAAGGACGAGGACATTTCACTATTCAAAAAA
CATAGTTTCAAAATCGACCAGCGTTTTAAAGGAGTTTCTTTTCTTTGCAA
GCTTTCTAGACCAT

BO20433.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 12:54:38 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 12:54:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:54:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15895923..15896252 17..346 1650 100 Plus
Blast to na_te.dros performed 2014-11-27 12:54:37
Subject Length Description Subject Range Query Range Score Percent Strand
Tirant 8526 Tirant TIRANT 8526bp 457..516 63..6 106 66.7 Minus

BO20433.complete Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:07:10 Download gff for BO20433.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15895928..15896252 22..348 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:07:10 Download gff for BO20433.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15895928..15896252 22..348 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:25:29 Download gff for BO20433.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15889028..15889352 22..348 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:25:29 Download gff for BO20433.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15889028..15889352 22..348 99   Plus

BO20433.pep Sequence

Translation from 16 to 364

> BO20433.pep
MLSIFRCFSSHYCEGGGQTNAFVSMSVLNTALECREFRRKRHFCLAANTP
RNMQHVSSSRHPSLHSVSTFLLLWRRLHPRARNVARTRTFHYSKNIVSKS
TSVLKEFLFFASFLDH
Sequence BO20433.pep has no blast hits.