BO20501.complete Sequence
958 bp assembled on 2009-05-13
GenBank Submission: KX799529
> BO20501.complete
GAAGTTATCAGTCGACATGCTTACCGACAGAGTTCTGGCCACCAAGGAGG
CGCTAGTGGTGGCTCTGGGCGACAACTGGGAGCGTTACCGGGCCAACATG
AAGAATTGGTTTCGGAGCCGTTGGACTAAGGAGGAATTCGATGCGGAGTC
GCGGAAAATCCTAACACCTGACAAACTGCACCTGCACAATCAGTTCCTGC
TCGCCCTGCTCAACAAGATCGACGCCTTTGCTCCCCTGGAGAATCCTCCG
GCCGTCCAGACCAGCAGCAGTAGTGGCAACCGAAGCAAACGGCGCAAAAG
AAGTTCCCGCACCTTCGCCGAACGCCTTAATTTTGAGCTCAGCGACGTCC
TGGACTTTGTAGCCGAGGACAACATGCAAATCATTCGTCCGCCAACCACG
ATCGGTATTCCGTCGGACCAGCAACAGCAACAGCTTCAGTCGCAGCGGTA
CTGCGCGCAGGAACTTTTCCTGCCCGACGCGGGATTCATTATGGGACGAT
TTCTGATCGGTGCCTGGGAAATCGGACTTGTCTCCGTGGACGACAATGTC
GCCGAGTACGTTGCCATGGCCGTGCAAGTTCTGCTCAAGGATCTACTATC
GGCAATCATCAAGAAACGAAAGCACTACAAGACCAGCGGCGAGGGAAACT
TTTACTACGATGTAGGTGCTCCGTTGCGTGATCCTTCGCTGCGCAACACC
GTCACCCGGCAGAAGGTCGACGACACGCCGCTGGAACTGGACAAGGAACT
GAATACGGCCAACTTTATGCGGCGACAGAACGACGATGTGACCTTCCTCT
CCGCCTGCGAAGAAGTCCAACCCACCGAACGCACAGTAATCACCCTCAAG
GACTGCCAACTGGCCTTACGGGATCGCAACCTGATAGGCTCGCATGCCGT
CTACTCTATAAACATGGAACGACTCAATATGATGATGCATGCAAGCTTTC
TAGACCAT
BO20501.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:21:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ada1-2-RA | 927 | CG31866-PA | 1..924 | 17..940 | 4620 | 100 | Plus |
| Ada1-1-RB | 927 | CG31865-PB | 1..924 | 17..940 | 4590 | 99.8 | Plus |
| Ada1-1-RA | 927 | CG31865-PA | 1..924 | 17..940 | 4590 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ada1-2-RA | 1089 | CG31866-RA | 92..1015 | 17..940 | 4620 | 100 | Plus |
| Ada1-1-RB | 1068 | CG31865-RB | 71..994 | 17..940 | 4590 | 99.8 | Plus |
| Ada1-1-RA | 1093 | CG31865-RA | 96..1019 | 17..940 | 4590 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11992993..11993792 | 17..816 | 4000 | 100 | Plus |
| 2L | 23513712 | 2L | 11996904..11997703 | 17..816 | 3985 | 99.9 | Plus |
| 2L | 23513712 | 2L | 11993857..11993980 | 817..940 | 620 | 100 | Plus |
| 2L | 23513712 | 2L | 11997768..11997891 | 817..940 | 605 | 99.2 | Plus |
Blast to na_te.dros performed 2014-11-26 16:21:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| accord | 7404 | accord ACCORD 7404bp | 6601..6633 | 154..186 | 111 | 81.8 | Plus |
BO20501.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:46 Download gff for
BO20501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada1-2-RA | 88..1011 | 17..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:58:46 Download gff for
BO20501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada1-2-RA | 92..1015 | 17..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:08 Download gff for
BO20501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada1-2-RA | 92..1015 | 17..942 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:17:08 Download gff for
BO20501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11992993..11993792 | 17..816 | 100 | -> | Plus |
| 2L | 11993857..11993980 | 817..942 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:58:46 Download gff for
BO20501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11992993..11993792 | 17..816 | 100 | -> | Plus |
| arm_2L | 11993857..11993980 | 817..942 | 98 | | Plus |
BO20501.pep Sequence
Translation from 16 to 958
> BO20501.pep
MLTDRVLATKEALVVALGDNWERYRANMKNWFRSRWTKEEFDAESRKILT
PDKLHLHNQFLLALLNKIDAFAPLENPPAVQTSSSSGNRSKRRKRSSRTF
AERLNFELSDVLDFVAEDNMQIIRPPTTIGIPSDQQQQQLQSQRYCAQEL
FLPDAGFIMGRFLIGAWEIGLVSVDDNVAEYVAMAVQVLLKDLLSAIIKK
RKHYKTSGEGNFYYDVGAPLRDPSLRNTVTRQKVDDTPLELDKELNTANF
MRRQNDDVTFLSACEEVQPTERTVITLKDCQLALRDRNLIGSHAVYSINM
ERLNMMMHASFLDH
BO20501.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ada1-2-PA | 308 | CG31866-PA | 1..308 | 1..308 | 1583 | 100 | Plus |
| Ada1-1-PB | 308 | CG31865-PB | 1..308 | 1..308 | 1578 | 99.7 | Plus |
| Ada1-1-PA | 308 | CG31865-PA | 1..308 | 1..308 | 1578 | 99.7 | Plus |
