BO20589.complete Sequence
1328 bp assembled on 2009-05-13
GenBank Submission: KX799084
> BO20589.complete
GAAGTTATCACCTCGACATGCCTTTAAATCTTACCCGGGAATCCGTACGA
GAACTCTGTTGCACATGCCTGCTCCAATTGGAGAAGGAACCCTTGAAGAC
AGAGCTCCAATCAGATGAGATTCCAATCAGCCAGGAGCTGCAGCAGCTGC
TCAACATAAATCTATCGCAGGATGTGGAGAACCAGGACGCCGACCAGCAG
TGGCTGCCCAACGAACTGTGCCTGGAATGCCGCAGCGCCGTGCAGAATTT
CGAAAAGTTCCGCAGGAAAGCCGACGAGTGCAGGAAGCAGCTGCTGGAAA
TGCTGAAGAAAGACCCACGGGAACCCACTTTCGAAGTAGTCTACGATGGC
AGGGAGGAGGACCAAGAGTCTCTGCATGGTCTGGAACCACCAGAACCCGC
TCCCGACCCAGATCCCATCGATGAGCCGGCTATAAAAAGTGATAAATCCC
CCCGAAAGTCCTTCAGGGGATCAAGGAACACCCTGAAGTGTTCTGTGTGC
CGGCGCAGTTTTGCCCACCAGATCACCCTAGCAGCGCACATCCGTAAGGT
GCACGAGGGCAGCAAAAGGCCCTTCCAATGCGATCAGTGCGAGAAGGCCT
ACAGTTTCATGGGCGGTCTGTATACCCACATTCGAGAGGTGCATGCCCCC
AAGGAGCGACGCCATCCCTGCGACCAGCCAGGCTGCGAGAGAATCTACAC
CAGCCGCATAGCCATGCAGAAGCACAAAAGGCTGAAGCACAGTCCGCGTG
ACCGCGATGCTTTGAAGAAATTCATCTGCGAGCAGTGCGGAGCCAGCTTT
AACCAGTCGGCGAATCTTAAATACCACCTTAAGACAAAGCATCCCACGGA
GGACGAGGTGGCCGCCAGGGAGGGCGGCGCCGGAGAGCGCCATTTCTGCG
ACATTTGTCAAAAGGAGTTCCATTCACGATACACCCTCAAGTACCACACT
TTGCAGCAGCACGAGGTGCAGGAAGAGTTGCCCCACGAATGCCAGGTCTG
TGGACGCCGGATGGCCAAGAAGTTCATGCTGCTGCAGCACATGCTGATGC
ACTCGAACGACAAGTTGCCCTGCGAGCACTGCGGCAGAAGATTTGCCAGG
CGATTCGAGCTCGAAGCCCATGTGAGAGCAGTCCACTTAAAGCTGAAACC
CTTTCCCTGTCACCACTGTCCGGAGAGCTTTGCTTCTAGGAAAACCCTGC
GGCACCATGAGTACATACACACGGGTGAGAAGCCCTACATTTGCGACACC
TGTGGACAGGCCTTCCGGCAGCAGACGTGTCTTAAAAACCACCGGAAGGT
GCACGAGAAGGCAAGCTTTCTAGACCAT
BO20589.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:17:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3032-RB | 1296 | CG3032-PB | 1..1293 | 18..1310 | 6450 | 99.9 | Plus |
| CG3032-RA | 1296 | CG3032-PA | 1..1293 | 18..1310 | 6450 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:17:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3032-RB | 1643 | CG3032-RB | 299..1591 | 18..1310 | 6450 | 99.9 | Plus |
| CG3032-RA | 1424 | CG3032-RA | 80..1372 | 18..1310 | 6450 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:17:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7012291..7013583 | 1310..18 | 6450 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:17:27 has no hits.
BO20589.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:18 Download gff for
BO20589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3032-RA | 79..1372 | 17..1312 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:08:18 Download gff for
BO20589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3032-RA | 79..1372 | 17..1312 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:42 Download gff for
BO20589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3032-RA | 79..1372 | 17..1312 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:42 Download gff for
BO20589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7012289..7013583 | 17..1312 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:08:18 Download gff for
BO20589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6906322..6907616 | 17..1312 | 99 | | Minus |
BO20589.pep Sequence
Translation from 17 to 1328
> BO20589.pep
MPLNLTRESVRELCCTCLLQLEKEPLKTELQSDEIPISQELQQLLNINLS
QDVENQDADQQWLPNELCLECRSAVQNFEKFRRKADECRKQLLEMLKKDP
REPTFEVVYDGREEDQESLHGLEPPEPAPDPDPIDEPAIKSDKSPRKSFR
GSRNTLKCSVCRRSFAHQITLAAHIRKVHEGSKRPFQCDQCEKAYSFMGG
LYTHIREVHAPKERRHPCDQPGCERIYTSRIAMQKHKRLKHSPRDRDALK
KFICEQCGASFNQSANLKYHLKTKHPTEDEVAAREGGAGERHFCDICQKE
FHSRYTLKYHTLQQHEVQEELPHECQVCGRRMAKKFMLLQHMLMHSNDKL
PCEHCGRRFARRFELEAHVRAVHLKLKPFPCHHCPESFASRKTLRHHEYI
HTGEKPYICDTCGQAFRQQTCLKNHRKVHEKASFLDH
BO20589.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:54:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3032-PB | 431 | CG3032-PB | 1..431 | 1..431 | 2366 | 100 | Plus |
| CG3032-PA | 431 | CG3032-PA | 1..431 | 1..431 | 2366 | 100 | Plus |
| CG7386-PA | 662 | CG7386-PA | 6..459 | 9..432 | 393 | 25.9 | Plus |
| CG12299-PA | 736 | CG12299-PA | 188..505 | 99..433 | 368 | 30.5 | Plus |
| CG11247-PC | 522 | CG11247-PC | 105..376 | 140..431 | 354 | 29.7 | Plus |
| CG7386-PA | 662 | CG7386-PA | 289..613 | 153..431 | 245 | 24.7 | Plus |
| CG12299-PA | 736 | CG12299-PA | 283..551 | 157..376 | 188 | 23.9 | Plus |
