BO20604.complete Sequence
598 bp assembled on 2009-05-13
> BO20604.complete
GAAGTTATCAGTCGACATGAAAAGAGCGGCCGAAATGGACGAATTGACGT
ATCAGACAGCTGTAAAAAAGGCCCAACTGGTTGAGAGGAATCCCCAGTTG
CAGATAAACCCCATGCGTGTGTCCATGCACCAGGAGGAGGATATCATCGA
ATTGGCCCAACAAATTCAGAATGCTGATAAACAATTGAAAAACACAACTT
GCCAAAAGCTGGGGGTCATAATGGAGCAGATCAAAATGCTTCAGGCCCAA
GCGATGGAGATACTTAAGGAGTCCACTCTCAACCGAGATCTGCACAGTGC
GGCCTGCAATTTCACCAAAAAACCCGGACACATCTATCATCTTTATCAAA
GGCCATCGGGTCAAAACTATTTCAGCATGCTATCACCGGAAGAATGGAGT
CTCTCCGTTGACCAAACATTCAAAGGCAGCTACAGGTTGGAGTACGATTT
GAGCTGGACCCCACTGGACAAGATTAAGGAGCAGGATGAGAAGCTAAAGT
GGGCGGAGCAGTGCATGCTAAAGGCACTAGATGGTGGGCGTGGTTCGGCC
ATGGCAATTGACTTTAATATAAGCAATGATGCAAGCTTTCTAGACCAT
BO20604.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:54:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31800-RA | 549 | CG31800-PA | 1..546 | 35..580 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31800-RA | 751 | CG31800-RA | 103..666 | 17..580 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19033742..19033930 | 580..392 | 945 | 100 | Minus |
| 2L | 23513712 | 2L | 19033988..19034152 | 392..228 | 825 | 100 | Minus |
| 2L | 23513712 | 2L | 19034205..19034363 | 229..71 | 795 | 100 | Minus |
| 2L | 23513712 | 2L | 19034420..19034474 | 71..17 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:54:19 has no hits.
BO20604.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:05 Download gff for
BO20604.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31800-RA | 1..546 | 35..582 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:47:22 Download gff for
BO20604.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31800-RA | 103..666 | 17..582 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:19 Download gff for
BO20604.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31800-RA | 103..666 | 17..582 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:19 Download gff for
BO20604.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19033738..19033930 | 392..582 | 98 | <- | Minus |
| 2L | 19033989..19034150 | 230..391 | 100 | <- | Minus |
| 2L | 19034205..19034362 | 72..229 | 100 | <- | Minus |
| 2L | 19034420..19034474 | 17..71 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:47:22 Download gff for
BO20604.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19033738..19033930 | 392..582 | 98 | <- | Minus |
| arm_2L | 19033989..19034150 | 230..391 | 100 | <- | Minus |
| arm_2L | 19034205..19034362 | 72..229 | 100 | <- | Minus |
| arm_2L | 19034420..19034474 | 17..71 | 100 | | Minus |
BO20604.pep Sequence
Translation from 16 to 598
> BO20604.pep
MKRAAEMDELTYQTAVKKAQLVERNPQLQINPMRVSMHQEEDIIELAQQI
QNADKQLKNTTCQKLGVIMEQIKMLQAQAMEILKESTLNRDLHSAACNFT
KKPGHIYHLYQRPSGQNYFSMLSPEEWSLSVDQTFKGSYRLEYDLSWTPL
DKIKEQDEKLKWAEQCMLKALDGGRGSAMAIDFNISNDASFLDH
BO20604.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:17:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31800-PA | 182 | CG31800-PA | 1..182 | 7..188 | 948 | 100 | Plus |
