BO20607.complete Sequence
1612 bp assembled on 2009-05-13
GenBank Submission: KX795770
> BO20607.complete
GAAGTTATCAGTCGACATGTGGCTCGCTGTGTTGGCTCTGCTGGTTCTGC
CACTGATCACATTGGTGTACTTTGAACGGAAGGCATCGCAACGGCGCCAA
CTGCTCAAGGAATTCAATGGACCCACTCCGGTGCCCATTTTGGGCAACGC
CAATCGGATTGGCAAAAATCCGGCAGAAATACTGTCTACATTCTTTGATT
GGTGGTACGACTACGGAAAAGATAACTTTCTCTTCTGGATCGGATACAGT
TCCCACATTGTGATGACCAATCCCAAGCAATTGGAGTACATTTTGAACAG
TCAGCAACTGATACAAAAATCCACCATCTACGATCTACTGCATCCATGGC
TGGGTCATGGTCTTCTAACGAGTTTTGGTAGTAAATGGCATAAACACCGC
AAGATGATCACCCCATCCTTCCACTTCAACATCCTGCAGGACTTCCACGA
GGTGATGAACGAGAACTCCGCAAAGTTTATGACTCAGTTGAAGAAGGCGA
GCGCGGGAGACACTATCATTGATTTCCAGGAGCATGCCAACTACCTTACT
TTGGATGTCATCTGTGACACGGCGATGGGAGTGCCCATCAATGCCATGGA
ACAGCGTGACTCCTCCATTGTCCAGGCATTCAGAGATATGTGTTACAATA
TAAATATGAGAGCATTTCATCCATTTAAGCGCTCCAATCGCGTGTTTAGT
TTAACACCTGAGTTTTCAGCCTATCAAAAAACTTTGAAGACACTTCAAGA
TTTTACGTATGACATCATCGAAAAACGAGTATATGCTCTCCAGAATGGAG
GATCTAAGGAGGACCACGATCCATCGTTGCCACGAAAGAAGATGGCATTT
TTAGACACCCTGCTATCCTCCACCATTGACGGTCGTCCTCTCACACGACA
GGAGATCTACGAGGAGGTATCCACCTTTATGTTTGAAGGACACGACACGA
CCACCTCGGGAGTATCGTTCTCCGTATATCTTCTCTCGCGACATCCCGAT
GTCCAGAGGAAATTGTATCGGGAGCAATGTGAAGTCATGGGTCATGATAT
GAACAGAAGTGTCAGTTTCCAGGAGATAGCCAAAATGAAATATCTAGATC
TGTTTATTAAGGAGGCGCAGCGCGTTTATCCCAGCGTTCCATTTATAGGG
CGATACTGCGATAAGGATTATGATATCAATGGCAGTATAGTGCCCAAGGG
TACAACTCTGAATTTGGCTCTCATCCTGCTGGGCTACAACGATCGCATCT
TCAAGGATCCCCATCATTTTCGTCCGGAGCGATTTGAGGAGGAGAAACCC
GCTCCCTTTGAGTATTTGCCTTTTAGTGCCGGGCCACGAAACTGCATTGG
CCAAAAGTTCGCGCTCCTGGAACTTAAGACAGTTATATCAAAGGTGGTGC
GGTCCTTTGAGGTCCTTCCAGCAGTTGATGAACTGGTCTCCACGGATGGT
CGCCTAAATACCTACCTGGGTCTCGCCCCAGACGAAAAGTTGAAACGCGA
GGCAGGGCGCCACAAATACGATCCCATTCTATCCGCGGTCCTAACCCTTA
AATCAGACAATGGTCTGCACCTTCGTCTCAGGGAAAGGAGGTCCGCAAGC
TTTCTAGACCAT
BO20607.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:39:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4e3-RA | 1581 | CG4105-PA | 1..1578 | 17..1594 | 7890 | 100 | Plus |
| Cyp4e2-RB | 1581 | CG2060-PB | 343..666 | 359..682 | 660 | 80.2 | Plus |
| Cyp4e2-RA | 1581 | CG2060-PA | 343..666 | 359..682 | 660 | 80.2 | Plus |
| Cyp4e2-RB | 1581 | CG2060-PB | 820..1575 | 836..1588 | 625 | 72.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:39:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4e3-RA | 1805 | CG4105-RA | 52..1629 | 17..1594 | 7890 | 100 | Plus |
| Cyp4e2-RB | 1880 | CG2060-RB | 500..823 | 359..682 | 660 | 80.2 | Plus |
| Cyp4e2-RA | 1783 | CG2060-RA | 403..726 | 359..682 | 660 | 80.2 | Plus |
| Cyp4e2-RB | 1880 | CG2060-RB | 977..1732 | 836..1588 | 625 | 72.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:39:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9748015..9748430 | 1594..1179 | 2080 | 100 | Minus |
| 2L | 23513712 | 2L | 9748718..9749087 | 1006..637 | 1850 | 100 | Minus |
| 2L | 23513712 | 2L | 9749150..9749501 | 636..285 | 1760 | 100 | Minus |
| 2L | 23513712 | 2L | 9748489..9748663 | 1178..1004 | 875 | 100 | Minus |
| 2L | 23513712 | 2L | 9749861..9750020 | 176..17 | 800 | 100 | Minus |
| 2R | 25286936 | 2R | 8445606..8445883 | 359..636 | 595 | 80.9 | Plus |
| 2L | 23513712 | 2L | 9749560..9749672 | 286..174 | 565 | 100 | Minus |
| 2R | 25286936 | 2R | 8448160..8448417 | 344..601 | 480 | 79.1 | Plus |
| 2R | 25286936 | 2R | 8446621..8447016 | 1193..1588 | 315 | 72 | Plus |
| 2R | 25286936 | 2R | 8446141..8446300 | 836..995 | 290 | 78.8 | Plus |
| 2R | 25286936 | 2R | 8448726..8448854 | 836..964 | 225 | 78.3 | Plus |
| 2R | 25286936 | 2R | 8446435..8446522 | 1067..1154 | 200 | 81.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:39:39 has no hits.
BO20607.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:59 Download gff for
BO20607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4e3-RA | 1..1578 | 17..1596 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:50:01 Download gff for
BO20607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4e3-RA | 52..1629 | 17..1596 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:02 Download gff for
BO20607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4e3-RA | 52..1629 | 17..1596 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:02 Download gff for
BO20607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9748011..9748430 | 1179..1596 | 99 | <- | Minus |
| 2L | 9748489..9748660 | 1007..1178 | 100 | <- | Minus |
| 2L | 9748718..9749087 | 637..1006 | 100 | <- | Minus |
| 2L | 9749150..9749499 | 287..636 | 100 | <- | Minus |
| 2L | 9749560..9749669 | 177..286 | 100 | <- | Minus |
| 2L | 9749861..9750020 | 17..176 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:50:01 Download gff for
BO20607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9748011..9748430 | 1179..1596 | 99 | <- | Minus |
| arm_2L | 9748489..9748660 | 1007..1178 | 100 | <- | Minus |
| arm_2L | 9748718..9749087 | 637..1006 | 100 | <- | Minus |
| arm_2L | 9749150..9749499 | 287..636 | 100 | <- | Minus |
| arm_2L | 9749560..9749669 | 177..286 | 100 | <- | Minus |
| arm_2L | 9749861..9750020 | 17..176 | 100 | | Minus |
BO20607.pep Sequence
Translation from 16 to 1612
> BO20607.pep
MWLAVLALLVLPLITLVYFERKASQRRQLLKEFNGPTPVPILGNANRIGK
NPAEILSTFFDWWYDYGKDNFLFWIGYSSHIVMTNPKQLEYILNSQQLIQ
KSTIYDLLHPWLGHGLLTSFGSKWHKHRKMITPSFHFNILQDFHEVMNEN
SAKFMTQLKKASAGDTIIDFQEHANYLTLDVICDTAMGVPINAMEQRDSS
IVQAFRDMCYNINMRAFHPFKRSNRVFSLTPEFSAYQKTLKTLQDFTYDI
IEKRVYALQNGGSKEDHDPSLPRKKMAFLDTLLSSTIDGRPLTRQEIYEE
VSTFMFEGHDTTTSGVSFSVYLLSRHPDVQRKLYREQCEVMGHDMNRSVS
FQEIAKMKYLDLFIKEAQRVYPSVPFIGRYCDKDYDINGSIVPKGTTLNL
ALILLGYNDRIFKDPHHFRPERFEEEKPAPFEYLPFSAGPRNCIGQKFAL
LELKTVISKVVRSFEVLPAVDELVSTDGRLNTYLGLAPDEKLKREAGRHK
YDPILSAVLTLKSDNGLHLRLRERRSASFLDH
BO20607.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:17:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4e3-PA | 526 | CG4105-PA | 1..526 | 1..526 | 2768 | 100 | Plus |
| Cyp4e2-PB | 526 | CG2060-PB | 1..525 | 1..524 | 1959 | 69 | Plus |
| Cyp4e2-PA | 526 | CG2060-PA | 1..525 | 1..524 | 1959 | 69 | Plus |
| Cyp4e1-PA | 531 | CG2062-PA | 1..525 | 1..524 | 1925 | 67.6 | Plus |
| Cyp4d1-PA | 512 | CG3656-PA | 1..479 | 1..466 | 929 | 40.3 | Plus |
