Clone BO20615 Report

Search the DGRC for BO20615

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:206
Well:15
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO20615.pep: Imported from assembly
Sequenced Size:673

Clone Sequence Records

BO20615.complete Sequence

673 bp assembled on 2009-05-13

> BO20615.complete
GAAGTTATCAGTCGACATGAGCAGCACTGGTGTTGCAAGTAGCAGCACAA
CAGCCGAAGAGGATTGGCCCACGGCCGTTGAGTTTGTGATTATGACAACG
CCCGCAAGCGAATTGGAAGCCAGCACGGAAACCATTGGTAACAATGGCAC
CACCGAAACGACCGTTGGCGAGGCACCCATCATCGGATCGTCGGAAGGAT
CCACACGATCGATGGAGCCAACCACCGCGAGTCCGCTGATGAGCACAAAC
CCATCGAGCAGCAGCAGTCTGGTTAGCACCATTCCCTTGCCACCGACAGC
GGGACTGCCTGTGCAGGATAATCAGCCAGTGCCGTGCACATGCGGCGTCT
TCCTCTCCTCGCAAATCCCAAATGGCTTGCCGACAAAGCCACTTATCCAC
CAGGAATTGGATCATATGTTTCCCTGCAATGCCATCGGTCGCAAGCAGTG
TCAAACCAAATGCCTAGAGACGATCGTACAACATCTGCCGAATTCCGCAA
ATATAGTATGCTCCGCACTGGGTCACGATTGTCACAAGGAACGGGCCTAT
TTGTTCATCAAGAACTGTCACAATCAATGGGTTAATACCAATCTGCAGGC
GGGCAGGGAGTACTGTTGTCGCTCTGGCGTTCCCTACCGTTGCCCATTGA
TGGGTGCAAGCTTTCTAGACCAT

BO20615.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:28:14
Subject Length Description Subject Range Query Range Score Percent Strand
Fcp3C-RA 849 CG4015-PA 207..846 16..655 3200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:28:15
Subject Length Description Subject Range Query Range Score Percent Strand
Fcp3C-RA 963 CG4015-RA 287..926 16..655 3200 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:28:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3173668..3174124 472..16 2285 100 Minus
X 23542271 X 3173413..3173596 655..472 920 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:28:14 has no hits.

BO20615.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:57 Download gff for BO20615.complete
Subject Subject Range Query Range Percent Splice Strand
Fcp3C-RA 1319..1957 17..657 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:59:12 Download gff for BO20615.complete
Subject Subject Range Query Range Percent Splice Strand
Fcp3C-RA 288..926 17..657 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:02:01 Download gff for BO20615.complete
Subject Subject Range Query Range Percent Splice Strand
Fcp3C-RA 288..926 17..657 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:02:01 Download gff for BO20615.complete
Subject Subject Range Query Range Percent Splice Strand
X 3173411..3173595 473..657 98 <- Minus
X 3173668..3174123 17..472 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:59:12 Download gff for BO20615.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 3067444..3067628 473..657 98 <- Minus
arm_X 3067701..3068156 17..472 100   Minus

BO20615.pep Sequence

Translation from 16 to 673

> BO20615.pep
MSSTGVASSSTTAEEDWPTAVEFVIMTTPASELEASTETIGNNGTTETTV
GEAPIIGSSEGSTRSMEPTTASPLMSTNPSSSSSLVSTIPLPPTAGLPVQ
DNQPVPCTCGVFLSSQIPNGLPTKPLIHQELDHMFPCNAIGRKQCQTKCL
ETIVQHLPNSANIVCSALGHDCHKERAYLFIKNCHNQWVNTNLQAGREYC
CRSGVPYRCPLMGASFLDH

BO20615.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:17:35
Subject Length Description Subject Range Query Range Score Percent Strand
Fcp3C-PA 282 CG4015-PA 70..282 1..213 1142 100 Plus