BO20618.complete Sequence
1501 bp assembled on 2009-05-13
GenBank Submission: KX795132
> BO20618.complete
GAAGTTATCAGTCGACATGTTGACCAAACTGTTAAAGATTAGCTGCACCT
CGAGGCAGTGCACCTTTGCCAAGCCGTATCAGGCGATACCAGGACCACGA
GGACCCTTTGGAATGGGTAATCTATACAATTACCTGCCCGGAATCGGATC
CTATTCCTGGCTAAGATTGCACCAAGCCGGCCAGGATAAGTATGAGAAAT
ATGGCGCAATTGTGCGGGAAACTATAGTTCCTGGGCAGGACATTGTCTGG
TTGTACGATCCCAAGGACATAGCTTTGCTGCTCAACGAGCGGGATTGTCC
GCAGCGAAGAAGTCACCTGGCACTGGCTCAATATCGCAAGAGCCGACCGG
ATGTCTATAAAACCACCGGCTTGCTGCCCACCAATGGTCCGGAATGGTGG
CGTATACGTGCCCAGGTGCAAAAGGAGCTGAGTGCACCAAAGAGTGTGCG
GAACTTTGTTCGCCAAGTGGATGGAGTGACCAAGGAGTTCATTAGATTTC
TACAAGAATCTCGCAATGGTGGTGCCATTGATATGCTGCCCAAGCTCACC
AGATTGAATTTGGAATTAACCTGTTTGCTTACCTTTGGAGCTCGTCTGCA
GTCTTTTACTGCCCAGGAACAAGATCCTAGATCCCGATCCACACGCTTGA
TGGATGCGGCTGAGACCACCAATAGCTGCATCCTGCCCACAGATCAGGGC
CTCCAGCTGTGGCGATTTCTGGAGACACCTAGCTTTCGCAAACTAAGCCA
GGCCCAATCATATATGGAGAGTGTGGCCCTGGAGCTAGTGGAGGAGAATG
TTAGGAATGGTTCAGTGGGATCTTCACTGATCTCGGCTTATGTAAAAAAT
CCCGAGCTTGATCGCAGTGACGTGGTGGGCACTGCTGCAGATTTACTCTT
GGCTGGCATCGATACCACTTCGTATGCCTCGGCATTTCTGCTCTATCACA
TAGCACGAAATCCGGAGGTGCAGCAAAAACTGCACGAGGAGGCCAGGAGA
GTGCTTCCGAGTGCCAAGGACGAGCTATCCATGGATGCCCTACGAACAGA
TATCACCTATACGAGGGCTGTCCTCAAGGAATCACTACGCTTGAATCCCA
TTGCCGTGGGCGTGGGCAGGATTCTTAATCAGGATGCGATCTTCAGTGGC
TACTTTGTGCCAAAGGGGACCACCGTGGTTACCCAGAACATGGTAGCCTG
TCGGCTGGAGCAGCACTTCCAGGATCCCCTGCGCTTCCAACCAGATCGAT
GGCTCCAGCACCGTAGTGCCCTCAATCCCTATCTGGTCCTTCCCTTCGGT
CACGGAATGCGGGCCTGCATTGCCCGCCGTTTGGCCGAGCAGAATATGCA
CATTTTGCTTCTCAGGCTGCTGCGTGAATACGAATTGATTTGGAGCGGAT
CCGATGATGAGATGGGTGTGAAGACCCTGTTGATAAATAAACCCGATGCT
CCAGTGCTGATCGATCTGCGATTGCGTAGAGAAGCAAGCTTTCTAGACCA
T
BO20618.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:04:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dib-RA | 1470 | CG12028-PA | 1..1467 | 17..1483 | 7335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:04:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dib-RA | 1975 | CG12028-RA | 49..1515 | 17..1483 | 7335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:04:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4063030..4063631 | 567..1168 | 3010 | 100 | Plus |
| 3L | 28110227 | 3L | 4062340..4062889 | 17..566 | 2750 | 100 | Plus |
| 3L | 28110227 | 3L | 4063690..4063888 | 1168..1366 | 995 | 100 | Plus |
| 3L | 28110227 | 3L | 4063974..4064091 | 1366..1483 | 590 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 11:04:30 has no hits.
BO20618.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:55 Download gff for
BO20618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dib-RA | 42..1503 | 22..1485 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:12:36 Download gff for
BO20618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dib-RA | 54..1515 | 22..1485 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:38:11 Download gff for
BO20618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dib-RA | 54..1515 | 22..1485 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:38:11 Download gff for
BO20618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4062345..4062889 | 22..566 | 100 | -> | Plus |
| 3L | 4063030..4063631 | 567..1168 | 100 | -> | Plus |
| 3L | 4063691..4063888 | 1169..1366 | 100 | -> | Plus |
| 3L | 4063975..4064091 | 1367..1485 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:12:36 Download gff for
BO20618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4062345..4062889 | 22..566 | 100 | -> | Plus |
| arm_3L | 4063030..4063631 | 567..1168 | 100 | -> | Plus |
| arm_3L | 4063691..4063888 | 1169..1366 | 100 | -> | Plus |
| arm_3L | 4063975..4064091 | 1367..1485 | 98 | | Plus |
BO20618.pep Sequence
Translation from 16 to 1501
> BO20618.pep
MLTKLLKISCTSRQCTFAKPYQAIPGPRGPFGMGNLYNYLPGIGSYSWLR
LHQAGQDKYEKYGAIVRETIVPGQDIVWLYDPKDIALLLNERDCPQRRSH
LALAQYRKSRPDVYKTTGLLPTNGPEWWRIRAQVQKELSAPKSVRNFVRQ
VDGVTKEFIRFLQESRNGGAIDMLPKLTRLNLELTCLLTFGARLQSFTAQ
EQDPRSRSTRLMDAAETTNSCILPTDQGLQLWRFLETPSFRKLSQAQSYM
ESVALELVEENVRNGSVGSSLISAYVKNPELDRSDVVGTAADLLLAGIDT
TSYASAFLLYHIARNPEVQQKLHEEARRVLPSAKDELSMDALRTDITYTR
AVLKESLRLNPIAVGVGRILNQDAIFSGYFVPKGTTVVTQNMVACRLEQH
FQDPLRFQPDRWLQHRSALNPYLVLPFGHGMRACIARRLAEQNMHILLLR
LLREYELIWSGSDDEMGVKTLLINKPDAPVLIDLRLRREASFLDH
BO20618.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:17:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dib-PA | 489 | CG12028-PA | 1..489 | 1..489 | 2530 | 100 | Plus |
| Cyp49a1-PE | 589 | CG18377-PE | 85..589 | 6..489 | 525 | 26.2 | Plus |
| Cyp49a1-PD | 589 | CG18377-PD | 85..589 | 6..489 | 525 | 26.2 | Plus |
| Cyp49a1-PA | 589 | CG18377-PA | 85..589 | 6..489 | 525 | 26.2 | Plus |
| Cyp12a4-PA | 536 | CG6042-PA | 44..527 | 18..480 | 479 | 28.5 | Plus |
