BO20621.complete Sequence
514 bp assembled on 2009-05-13
GenBank Submission: KX794148
> BO20621.complete
GAAGTTATCAGTCGACATGCATGGCTATCGGGCCGGTCTTTATATAGTTT
TTTCAGCCGTGCTGGTAATGTTTATCGAGATCAAGTGGCTTGTGACTATC
TTCCTGCAACTTCAGTGCGCAGAGGATAATTACCAGCGAAGGTCCTGCAG
CTGCTTGGCCTGCTGGCGACTTTCAGCGATTTGTGGCGGTTGGCGACCCA
CTCCTGTTTATGCGGTCATCGGCATCTGCCTGATCCTGTATCCCCACAAT
CTGTGGCTGAGTTATGTGGCCGGGATGTTCCTGATACTCCTCGGACTCCT
CAGACTGTGCACGCTGCTCCGATTCAGCGCCTCGAAGGAGGAGGGTCTCC
TGCCGCAGTGCGACTTTGAAAAGGTGTCGAGCTTTGTGGATACCATGGAG
GATGATTTCGCGGAGATTGGTGCCACGCAAGCGGGATTGGATGAGGAAGC
GGAGGAGGAGGGCGACGACCACACCGCCCTAGACGACGATGTTTGCGCAA
GCTTTCTAGACCAT
BO20621.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:41:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14086-RD | 639 | CG14086-PD | 151..636 | 11..496 | 2415 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:41:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14086-RD | 1536 | CG14086-RD | 953..1438 | 11..496 | 2415 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:41:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19279385..19279634 | 124..373 | 1250 | 100 | Plus |
| 3L | 28110227 | 3L | 19279698..19279821 | 373..496 | 620 | 100 | Plus |
| 3L | 28110227 | 3L | 19279040..19279115 | 49..124 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:41:47 has no hits.
BO20621.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:53 Download gff for
BO20621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14086-RA | 120..567 | 48..498 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:25:35 Download gff for
BO20621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14086-RC | 157..628 | 17..498 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:02:58 Download gff for
BO20621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14086-RD | 959..1438 | 17..498 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:02:58 Download gff for
BO20621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19278958..19278989 | 17..48 | 100 | -> | Plus |
| 3L | 19279040..19279114 | 49..123 | 100 | -> | Plus |
| 3L | 19279385..19279633 | 124..372 | 100 | -> | Plus |
| 3L | 19279698..19279821 | 373..498 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:25:35 Download gff for
BO20621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19272058..19272089 | 17..48 | 100 | -> | Plus |
| arm_3L | 19272140..19272214 | 49..123 | 100 | -> | Plus |
| arm_3L | 19272485..19272733 | 124..372 | 100 | -> | Plus |
| arm_3L | 19272798..19272921 | 373..498 | 98 | | Plus |
BO20621.pep Sequence
Translation from 16 to 514
> BO20621.pep
MHGYRAGLYIVFSAVLVMFIEIKWLVTIFLQLQCAEDNYQRRSCSCLACW
RLSAICGGWRPTPVYAVIGICLILYPHNLWLSYVAGMFLILLGLLRLCTL
LRFSASKEEGLLPQCDFEKVSSFVDTMEDDFAEIGATQAGLDEEAEEEGD
DHTALDDDVCASFLDH
BO20621.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:17:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14086-PD | 212 | CG14086-PD | 53..212 | 1..160 | 856 | 100 | Plus |
