BO20629.complete Sequence
997 bp assembled on 2009-05-13
GenBank Submission: KX799382
> BO20629.complete
GAAGTTATCAGTCGACATGAGCTTCCTGGAGTTTCTGCTGCTCCTGCTCG
TGCTGTACTATGTCGTGTACGTGCTCCTCTGGATCCTGCTCGACTGCAAT
GTGGCCCTGTGGTACAAGTCCCGTTTCGGAGTCTCGCTGTCGTCGATGCG
CGGACAGGTGGTTTGGATAACTGGTGCCTCGAGCGGAATTGGCCGCGCTT
TGGCGCTCAGCTTGGCCAGGCATGGAGTGAAATTGGTGCTAAGTGCCCGG
CGACTGGAGCAATTGGAGCAAGTGCAAGAGGAATGCCTAGCTGCAGCTCG
CGGACTGCTGGCCACCAAGGACGTGCTGGTCATTCAAATGGACATGCTCG
ATCTCGACGAGCATAAGACGCATCTCAACACGGTGCTCAATCACTTTCAT
CGACTGGATGTCCTTGTCAATAATGCTGGCCGATCCCAGCGAGCCAGTTG
GACCGAAGTCGAGATCGAGGTGGACCGGGAGCTGTTCGAACTGGATGTCT
TTGCGGTGGTCCACCTCAGCCGCCTGGTGGTGCGCTATTTCGTGGAGCAG
AACGGCGGTAGAGGACACATCGCTGCCACCTCCAGCATCGCCGGCTTCAG
TCCAGTGCCATTTTCACCCACCTACTGTGCCGCCAAGCACGCCCTTAACG
CCTACTTGCTCTCCCTGAAAGTGGAGATGCGCAAGCTGGATGTGTCGCTC
TTCGCACCGGGACCCATAGCCACCGATTTCCTGCAGGAGGCCTTCACTGG
CTCGCAGGGCGGAAAGGTGGGTCTGAGTACGGCCAATCAGAAACGGATGA
CGGCCCAGAGATGTGGCGATCTGTTCGCCGTTGCCTTGGCCAATAAGATG
GATCTCACCTGGTGCGGCCTCTTTCCCGTCAACCTCTTGGCCTACTGCGC
CCGGAATCCCACGCTGAGCAAGATTCTGGCTCAATTGATGACCGAGAAGA
CGCTGAACAAGATTCGCGAGGGCAAACTGGCAAGCTTTCTAGACCAT
BO20629.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:09:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31937-RA | 966 | CG31937-PA | 1..963 | 17..979 | 4815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:09:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31937-RA | 1184 | CG31937-RA | 94..1060 | 13..979 | 4820 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:09:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1729980..1730946 | 13..979 | 4820 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:09:26 has no hits.
BO20629.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:15 Download gff for
BO20629.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31937-RA | 39..1001 | 17..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:27:16 Download gff for
BO20629.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31937-RA | 98..1060 | 17..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:12:06 Download gff for
BO20629.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31937-RA | 98..1060 | 17..981 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:12:06 Download gff for
BO20629.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1729984..1730946 | 17..981 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:27:16 Download gff for
BO20629.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1729984..1730946 | 17..981 | 99 | | Plus |
BO20629.pep Sequence
Translation from 16 to 997
> BO20629.pep
MSFLEFLLLLLVLYYVVYVLLWILLDCNVALWYKSRFGVSLSSMRGQVVW
ITGASSGIGRALALSLARHGVKLVLSARRLEQLEQVQEECLAAARGLLAT
KDVLVIQMDMLDLDEHKTHLNTVLNHFHRLDVLVNNAGRSQRASWTEVEI
EVDRELFELDVFAVVHLSRLVVRYFVEQNGGRGHIAATSSIAGFSPVPFS
PTYCAAKHALNAYLLSLKVEMRKLDVSLFAPGPIATDFLQEAFTGSQGGK
VGLSTANQKRMTAQRCGDLFAVALANKMDLTWCGLFPVNLLAYCARNPTL
SKILAQLMTEKTLNKIREGKLASFLDH
BO20629.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:56:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31937-PA | 321 | CG31937-PA | 1..321 | 1..321 | 1626 | 100 | Plus |
CG7601-PA | 326 | CG7601-PA | 17..263 | 12..256 | 302 | 33.1 | Plus |
CG40485-PB | 247 | CG40485-PB | 8..210 | 48..245 | 221 | 29.7 | Plus |
CG40485-PA | 231 | CG40485-PA | 8..183 | 48..222 | 206 | 30.8 | Plus |
rdhB-PB | 248 | CG7077-PB | 8..202 | 45..239 | 203 | 30 | Plus |