Clone BO20629 Report

Search the DGRC for BO20629

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:206
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG31937-RA
Protein status:BO20629.pep: Imported from assembly
Sequenced Size:997

Clone Sequence Records

BO20629.complete Sequence

997 bp assembled on 2009-05-13

GenBank Submission: KX799382

> BO20629.complete
GAAGTTATCAGTCGACATGAGCTTCCTGGAGTTTCTGCTGCTCCTGCTCG
TGCTGTACTATGTCGTGTACGTGCTCCTCTGGATCCTGCTCGACTGCAAT
GTGGCCCTGTGGTACAAGTCCCGTTTCGGAGTCTCGCTGTCGTCGATGCG
CGGACAGGTGGTTTGGATAACTGGTGCCTCGAGCGGAATTGGCCGCGCTT
TGGCGCTCAGCTTGGCCAGGCATGGAGTGAAATTGGTGCTAAGTGCCCGG
CGACTGGAGCAATTGGAGCAAGTGCAAGAGGAATGCCTAGCTGCAGCTCG
CGGACTGCTGGCCACCAAGGACGTGCTGGTCATTCAAATGGACATGCTCG
ATCTCGACGAGCATAAGACGCATCTCAACACGGTGCTCAATCACTTTCAT
CGACTGGATGTCCTTGTCAATAATGCTGGCCGATCCCAGCGAGCCAGTTG
GACCGAAGTCGAGATCGAGGTGGACCGGGAGCTGTTCGAACTGGATGTCT
TTGCGGTGGTCCACCTCAGCCGCCTGGTGGTGCGCTATTTCGTGGAGCAG
AACGGCGGTAGAGGACACATCGCTGCCACCTCCAGCATCGCCGGCTTCAG
TCCAGTGCCATTTTCACCCACCTACTGTGCCGCCAAGCACGCCCTTAACG
CCTACTTGCTCTCCCTGAAAGTGGAGATGCGCAAGCTGGATGTGTCGCTC
TTCGCACCGGGACCCATAGCCACCGATTTCCTGCAGGAGGCCTTCACTGG
CTCGCAGGGCGGAAAGGTGGGTCTGAGTACGGCCAATCAGAAACGGATGA
CGGCCCAGAGATGTGGCGATCTGTTCGCCGTTGCCTTGGCCAATAAGATG
GATCTCACCTGGTGCGGCCTCTTTCCCGTCAACCTCTTGGCCTACTGCGC
CCGGAATCCCACGCTGAGCAAGATTCTGGCTCAATTGATGACCGAGAAGA
CGCTGAACAAGATTCGCGAGGGCAAACTGGCAAGCTTTCTAGACCAT

BO20629.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:09:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG31937-RA 966 CG31937-PA 1..963 17..979 4815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:09:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG31937-RA 1184 CG31937-RA 94..1060 13..979 4820 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:09:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1729980..1730946 13..979 4820 99.9 Plus
Blast to na_te.dros performed on 2014-11-27 13:09:26 has no hits.

BO20629.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:15 Download gff for BO20629.complete
Subject Subject Range Query Range Percent Splice Strand
CG31937-RA 39..1001 17..981 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:27:16 Download gff for BO20629.complete
Subject Subject Range Query Range Percent Splice Strand
CG31937-RA 98..1060 17..981 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:12:06 Download gff for BO20629.complete
Subject Subject Range Query Range Percent Splice Strand
CG31937-RA 98..1060 17..981 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:12:06 Download gff for BO20629.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1729984..1730946 17..981 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:27:16 Download gff for BO20629.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1729984..1730946 17..981 99   Plus

BO20629.pep Sequence

Translation from 16 to 997

> BO20629.pep
MSFLEFLLLLLVLYYVVYVLLWILLDCNVALWYKSRFGVSLSSMRGQVVW
ITGASSGIGRALALSLARHGVKLVLSARRLEQLEQVQEECLAAARGLLAT
KDVLVIQMDMLDLDEHKTHLNTVLNHFHRLDVLVNNAGRSQRASWTEVEI
EVDRELFELDVFAVVHLSRLVVRYFVEQNGGRGHIAATSSIAGFSPVPFS
PTYCAAKHALNAYLLSLKVEMRKLDVSLFAPGPIATDFLQEAFTGSQGGK
VGLSTANQKRMTAQRCGDLFAVALANKMDLTWCGLFPVNLLAYCARNPTL
SKILAQLMTEKTLNKIREGKLASFLDH

BO20629.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:56:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG31937-PA 321 CG31937-PA 1..321 1..321 1626 100 Plus
CG7601-PA 326 CG7601-PA 17..263 12..256 302 33.1 Plus
CG40485-PB 247 CG40485-PB 8..210 48..245 221 29.7 Plus
CG40485-PA 231 CG40485-PA 8..183 48..222 206 30.8 Plus
rdhB-PB 248 CG7077-PB 8..202 45..239 203 30 Plus