BO20630.complete Sequence
349 bp assembled on 2009-05-13
GenBank Submission: KX796946
> BO20630.complete
GAAGTTATCAGTCGACATGGGAGCATTGGCAGAGCTGGCTGGTGATGAGA
AAAACGGCGAAGGATCTCGTACTTTTGTGTTCACCAACGAGGGCCACACG
CTGGGAAATGCGCTGAAAACGATCATAGCCCGCTACCCGGAGGTGGATTT
CTGTGGCTACACGATTCCGCATCCCACGGAGCAGAAGCTGCACTTCCGCA
TTCAATCCCGTCGAGACAGAGCCATAGATATACTTAAACGGGGACTGGAG
GATCTGGAGGGTCTGTGTGATCATACAATCGTTACGTTCGAAAAGGAGAT
GGCCGAGTTTAATGCAATGAAAGTGGAAAATGCAAGCTTTCTAGACCAT
BO20630.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:38:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cg-RA | 318 | CG10685-PA | 1..315 | 17..331 | 1575 | 100 | Plus |
| l(2)37Cg-RD | 399 | CG10685-PD | 99..396 | 34..331 | 1490 | 100 | Plus |
| l(2)37Cg-RC | 351 | CG10685-PC | 52..348 | 35..331 | 1485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:38:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cg-RA | 404 | CG10685-RA | 58..372 | 17..331 | 1575 | 100 | Plus |
| l(2)37Cg-RD | 681 | CG10685-RD | 352..649 | 34..331 | 1490 | 100 | Plus |
| l(2)37Cg-RC | 633 | CG10685-RC | 305..601 | 35..331 | 1485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:38:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19133055..19133353 | 331..33 | 1495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:38:18 has no hits.
BO20630.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:15 Download gff for
BO20630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cg-RA | 1..315 | 17..333 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:09:50 Download gff for
BO20630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cg-RA | 58..372 | 17..333 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:27 Download gff for
BO20630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cg-RA | 58..372 | 17..333 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:27 Download gff for
BO20630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19133053..19133351 | 35..333 | 99 | <- | Minus |
| 2L | 19133409..19133426 | 17..34 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:09:50 Download gff for
BO20630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19133053..19133351 | 35..333 | 99 | <- | Minus |
| arm_2L | 19133409..19133426 | 17..34 | 100 | | Minus |
BO20630.pep Sequence
Translation from 16 to 349
> BO20630.pep
MGALAELAGDEKNGEGSRTFVFTNEGHTLGNALKTIIARYPEVDFCGYTI
PHPTEQKLHFRIQSRRDRAIDILKRGLEDLEGLCDHTIVTFEKEMAEFNA
MKVENASFLDH
BO20630.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:56:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cg-PA | 105 | CG10685-PA | 1..105 | 1..105 | 551 | 100 | Plus |
| l(2)37Cg-PC | 116 | CG10685-PC | 18..116 | 7..105 | 523 | 100 | Plus |
| l(2)37Cg-PD | 132 | CG10685-PD | 34..132 | 7..105 | 523 | 100 | Plus |
