BO20635.complete Sequence
643 bp assembled on 2009-05-13
GenBank Submission: KX799940
> BO20635.complete
GAAGTTATCAGTCGACATGATCAATCCCCAACTTTTGCTGATCGCCGCGC
TTATTGCGTTTATTGGGAAAGTGGCACACGCTCAAATCGCCTTTGTTGAG
GATCAAGACATTGATAAGAAGAAGGCCAACCTTGCGGGTCGCAAGCCACT
GTATTCGCCAGCCCGATGCCCCAAGCACCAGCTTCTTTATCCGGGGGACC
AGCAGAAGCAGAACGACTGGGTTTGCGACTGCGCGCCAGCCACACTGTAT
TACCCGGAGACCGATGGCTGCTATCCGGCCTACCGACAGGGACCCTGTGA
GGCTGGACAGATTCTGGTGCTCTACAAGGAGGAGATCATCCCGAAGTGCG
TACGAAATCCATGTAACAGGGACGGACACTTTATGATTCGCGACACATGC
TATGAGTTCGGAAACACCAAGAAGGAAGAAAACCCGTGTCCTTACCAGGA
GGCTTCCTTTGTACTTGGCGTGAATCCCACCAACTTGATGGTGGACTGTG
TGAAGCTGTCCGTTCAACTGGAGACGCGTATTTCGGACACGGAGCAGGCT
CCGCCGGAATACTACGTTGATTTGGCCGAGAAATGCGCACGCGGCAGTCG
CCTAATGGCTCAGGGAAAGTGTCCTGCAAGCTTTCTAGACCAT
BO20635.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:58:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12811-RA | 612 | CG12811-PA | 1..609 | 17..625 | 3045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:58:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12811-RA | 1002 | CG12811-RA | 262..870 | 17..625 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:58:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10047384..10047771 | 625..238 | 1940 | 100 | Minus |
| 3R | 32079331 | 3R | 10048416..10048536 | 137..17 | 605 | 100 | Minus |
| 3R | 32079331 | 3R | 10047841..10047944 | 239..136 | 520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 19:58:17 has no hits.
BO20635.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:53 Download gff for
BO20635.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12811-RA | 1..609 | 17..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:01:31 Download gff for
BO20635.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12811-RA | 262..870 | 17..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:11:45 Download gff for
BO20635.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12811-RA | 262..870 | 17..627 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:11:45 Download gff for
BO20635.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10047382..10047769 | 240..627 | 99 | <- | Minus |
| 3R | 10047841..10047943 | 137..239 | 100 | <- | Minus |
| 3R | 10048417..10048536 | 17..136 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:01:31 Download gff for
BO20635.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5873104..5873491 | 240..627 | 99 | <- | Minus |
| arm_3R | 5873563..5873665 | 137..239 | 100 | <- | Minus |
| arm_3R | 5874139..5874258 | 17..136 | 100 | | Minus |
BO20635.pep Sequence
Translation from 16 to 643
> BO20635.pep
MINPQLLLIAALIAFIGKVAHAQIAFVEDQDIDKKKANLAGRKPLYSPAR
CPKHQLLYPGDQQKQNDWVCDCAPATLYYPETDGCYPAYRQGPCEAGQIL
VLYKEEIIPKCVRNPCNRDGHFMIRDTCYEFGNTKKEENPCPYQEASFVL
GVNPTNLMVDCVKLSVQLETRISDTEQAPPEYYVDLAEKCARGSRLMAQG
KCPASFLDH
BO20635.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:17:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12811-PA | 203 | CG12811-PA | 1..203 | 1..203 | 1109 | 100 | Plus |
