BO20639.complete Sequence
694 bp assembled on 2009-05-13
GenBank Submission: KX799164
> BO20639.complete
GAAGTTATCAGTCGACATGGAGTTACGCAGCCGAACAAACAGGAGATTAG
TTGACTTCCTCAAAAGCGCAGGCGTTTACGAGGAAGGCATGGATATTGAG
GAAATGACCGAATTAGCAAGTGTCGTGCAGCAATCAGCTAGTATCAGTCC
CCAGGATGAGGATCTAGAAAGGGCTCTGCACGAGAGCGAGTCTGATTTTT
TGACTTCGCATCCCAGTGCTTTGCACAACTCCACGATGATCATGTCGCCG
CAAGTGTCCAGAAGAAATCCCTCAGACATGGACAGTCCACCGAGCGAGCC
GATCCGTATAACTTTTCGGGCTTTGGTGCACCGTGCCATGGACTGGAGTC
CCACCACGGGCAATCAAATTCCCGATCGCAAGCGCATTGCTGCGGATCGC
AATCAAAACGTCGAACTAGTTGGCAAACGTTCCAGAGCAACGCCGGCTAT
CAGCATTGGCCAGGCACCGGAGGATGAGCCGCACAATGCCGACGCCACAC
CCGTTTCCCCGGGCAACGAATGCGACTCCGGCGTCAGCTGGGAGGAGATA
TCTTTGTCCAGCGCCAGCGATAGCACCACTCTTCCTTCCATCGGCGAAAT
GCCCGATCGACATTTAATCAGCACCAGCAGCGTCGCCGTCTCGGATTTCT
CAGATGCCAATGAAATCAGCCAGGAAGCAAGCTTTCTAGACCAT
BO20639.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:48:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14931-RB | 663 | CG14931-PB | 1..660 | 17..676 | 3300 | 100 | Plus |
| CG14931-RC | 672 | CG14931-PC | 1..669 | 17..676 | 3175 | 98.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:48:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14931-RB | 912 | CG14931-RB | 106..765 | 17..676 | 3300 | 100 | Plus |
| CG14931-RC | 1024 | CG14931-RC | 209..877 | 17..676 | 3175 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:48:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11788834..11789328 | 182..676 | 2475 | 100 | Plus |
| 2L | 23513712 | 2L | 11788653..11788769 | 66..182 | 585 | 100 | Plus |
| 2L | 23513712 | 2L | 11788542..11788591 | 17..66 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:48:54 has no hits.
BO20639.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:08 Download gff for
BO20639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14931-RB | 82..741 | 17..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:38:47 Download gff for
BO20639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14931-RB | 106..765 | 17..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:08:54 Download gff for
BO20639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14931-RB | 106..765 | 17..678 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:08:54 Download gff for
BO20639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11788542..11788590 | 17..65 | 100 | -> | Plus |
| 2L | 11788653..11788768 | 66..181 | 100 | -> | Plus |
| 2L | 11788834..11789328 | 182..678 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:38:47 Download gff for
BO20639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11788542..11788590 | 17..65 | 100 | -> | Plus |
| arm_2L | 11788653..11788768 | 66..181 | 100 | -> | Plus |
| arm_2L | 11788834..11789328 | 182..678 | 99 | | Plus |
BO20639.pep Sequence
Translation from 16 to 694
> BO20639.pep
MELRSRTNRRLVDFLKSAGVYEEGMDIEEMTELASVVQQSASISPQDEDL
ERALHESESDFLTSHPSALHNSTMIMSPQVSRRNPSDMDSPPSEPIRITF
RALVHRAMDWSPTTGNQIPDRKRIAADRNQNVELVGKRSRATPAISIGQA
PEDEPHNADATPVSPGNECDSGVSWEEISLSSASDSTTLPSIGEMPDRHL
ISTSSVAVSDFSDANEISQEASFLDH
BO20639.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:56:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14931-PB | 220 | CG14931-PB | 1..220 | 1..220 | 1117 | 100 | Plus |
| CG14931-PC | 223 | CG14931-PC | 1..223 | 1..220 | 1103 | 98.7 | Plus |
