BO20640.complete Sequence
472 bp assembled on 2009-05-13
GenBank Submission: KX797661
> BO20640.complete
GAAGTTATCAGTCGACATGCCCGACAAAAGGCCACTGGATCCACTCCAGC
CGGTGCTCTACATTGACCACTGCCGTTATCGTCAAACTTATCGCAAGCGA
GCCCTGCACCTCCATTCTTCGCTGGCGGAGGCTCTGAGGGCCATTCAGCC
AAGGGTTAAGCTCCAGCTAAGGATCAACGACAAAGGCCCGCCCGAAGATG
GATCCTTTGAGGTTGCTATTGCTCCGCAACCAACCGATGATTCCACGGCC
CGTCAAAGTGTATGGACTGGACTAAGGCGGATGCCCAGTGCATCGAAGGT
TCCCCATGTGGACGACATTCTCACCCCAGTTTGTTTCGCCCTCAAACTGA
GGGATCCGCACAAGGAATCACATCGGCGGATGCTAACCAATTTGCGGCAC
AACGAAGGCAGTCGACCAAGGACGAGGACTATAAAAAATGTGTTAAATAA
TACCGCAAGCTTTCTAGACCAT
BO20640.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:24:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15147-RA | 441 | CG15147-PA | 1..438 | 17..454 | 2190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:24:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15147-RA | 636 | CG15147-RA | 164..601 | 17..454 | 2190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:24:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 17625781..17626218 | 454..17 | 2190 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:24:56 has no hits.
BO20640.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:07 Download gff for
BO20640.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15147-RA | 128..565 | 17..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:42:27 Download gff for
BO20640.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15147-RA | 129..566 | 17..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:11:02 Download gff for
BO20640.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15147-RA | 164..601 | 17..456 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:11:02 Download gff for
BO20640.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 17625779..17626218 | 17..456 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:42:27 Download gff for
BO20640.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 17625779..17626218 | 17..456 | 99 | | Minus |
BO20640.pep Sequence
Translation from 16 to 472
> BO20640.pep
MPDKRPLDPLQPVLYIDHCRYRQTYRKRALHLHSSLAEALRAIQPRVKLQ
LRINDKGPPEDGSFEVAIAPQPTDDSTARQSVWTGLRRMPSASKVPHVDD
ILTPVCFALKLRDPHKESHRRMLTNLRHNEGSRPRTRTIKNVLNNTASFL
DH
BO20640.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:56:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15147-PA | 146 | CG15147-PA | 1..146 | 1..146 | 773 | 100 | Plus |
BthD-PA | 249 | CG11177-PA | 22..127 | 7..117 | 163 | 36.6 | Plus |