Clone BO20641 Report

Search the DGRC for BO20641

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:206
Well:41
Vector:pDNR-Dual
Associated Gene/TranscriptCG31861-RA
Protein status:BO20641.pep: Imported from assembly
Sequenced Size:520

Clone Sequence Records

BO20641.complete Sequence

520 bp assembled on 2009-05-13

GenBank Submission: KX798783

> BO20641.complete
GAAGTTATCAGTCGACATGGGAAAGTCTACTGGATCGTCGTTTAAGCCCG
TCAAGCGTCTCAATAGAAAAATTAAAGAACCTGTTTCTCCAAAACTATCT
GCCAACCAAAATGTTACTCCCACCAGGCGGATTAAACGAATCAATACTCC
GGTGGCTGTCGATCCAAGTCCAAGTCCATCGGTGGTGGCGCGTCGAGCTC
GTACCAGTGCGGCATTAAAGAGTTTTATTAACAAATACAGGAGAGAACAT
CCTGGAAAGCTGCGCGCTGAGGTCGTCTCCATTTGGCGCAAAATGAGCGT
CGAAGAAAAGCAAGCCTTTCAAAGAATCGGCACAATTCAAGAAACTCCAA
CACACGTGCATTTTGAGGAGGAGGAAGTTCCTGTACCCATTTCCAATGAT
GTTATAGATATAGTTGAAGTTAGCCCACCGATACCGGAGAGAAACCCCTC
GATTTTTAGATATTTTTTAAATGCGATTAATAGGGCCTTGCATATGTTTT
ACGCAAGCTTTCTAGACCAT

BO20641.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:07:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG31861-RA 489 CG31861-PA 1..486 17..502 2430 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG31861-RA 764 CG31861-RA 166..651 17..502 2430 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12162007..12162492 17..502 2430 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:07:05 has no hits.

BO20641.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:45:28 Download gff for BO20641.complete
Subject Subject Range Query Range Percent Splice Strand
CG31861-RA 138..623 17..504 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:18:53 Download gff for BO20641.complete
Subject Subject Range Query Range Percent Splice Strand
CG31861-RA 166..651 17..504 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:18:53 Download gff for BO20641.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12162007..12162492 17..504 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:45:28 Download gff for BO20641.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12162007..12162492 17..504 99   Plus

BO20641.pep Sequence

Translation from 16 to 520

> BO20641.pep
MGKSTGSSFKPVKRLNRKIKEPVSPKLSANQNVTPTRRIKRINTPVAVDP
SPSPSVVARRARTSAALKSFINKYRREHPGKLRAEVVSIWRKMSVEEKQA
FQRIGTIQETPTHVHFEEEEVPVPISNDVIDIVEVSPPIPERNPSIFRYF
LNAINRALHMFYASFLDH

BO20641.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:56:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG31861-PA 162 CG31861-PA 1..162 1..162 829 100 Plus