BO20644.complete Sequence
511 bp assembled on 2009-05-13
GenBank Submission: KX796409
> BO20644.complete
GAAGTTATCAGTCGACATGCACCGATCACACCCGAGTATCAGTCGTCGCA
AGCATCTCATGAAGGAGATGATGGAGGACGACTACGCGCTGCCCACAGAA
ACTCAGCAGATTGCGCGGGTCATCAGCAGTCGGGGCAACAATCTCCACGA
GGTGGAGACCGTGGACGAAACGTTCCTTGTTTCGATGCCCAACAAATTCC
GCAAGAGCATGTGGGTGAAACGTGGCGACTTTCTGCTGGTCGAACCGATT
GAGGAGGGCGATAAAGTCAAAGCCGAGATTTGCAAAATACTCACACCCGA
ACATATAAAGGAATACACAAAAGCTGCAATTTGGCCGGATAAATTCACAA
AGAAACCTGTACAGGAGGAAGCCACCAGCCAAAACAAAGACGACTCCGAT
TTCGAGGATGATCTCCTGCCCAATACAAATCGGCCTGTAAATCGCGATTC
CTCCGACGAAGAGGAAGATGAGGAAACATCCAGCGAAGAGGACGCAAGCT
TTCTAGACCAT
BO20644.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:48:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31957-RB | 480 | CG31957-PB | 1..477 | 17..493 | 2385 | 100 | Plus |
| CG31957-RA | 480 | CG31957-PA | 1..477 | 17..493 | 2385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:48:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31957-RB | 885 | CG31957-RB | 124..600 | 17..493 | 2385 | 100 | Plus |
| CG31957-RA | 676 | CG31957-RA | 124..600 | 17..493 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:48:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3871556..3871870 | 493..179 | 1575 | 100 | Minus |
| 2L | 23513712 | 2L | 3872173..3872335 | 179..17 | 815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:48:49 has no hits.
BO20644.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:06 Download gff for
BO20644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31957-RA | 124..600 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:00:05 Download gff for
BO20644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31957-RA | 124..600 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:26:59 Download gff for
BO20644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31957-RA | 124..600 | 17..495 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:26:59 Download gff for
BO20644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3871553..3871869 | 180..495 | 99 | <- | Minus |
| 2L | 3872173..3872335 | 17..179 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:00:05 Download gff for
BO20644.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3871553..3871869 | 180..495 | 99 | <- | Minus |
| arm_2L | 3872173..3872335 | 17..179 | 100 | | Minus |
BO20644.pep Sequence
Translation from 16 to 511
> BO20644.pep
MHRSHPSISRRKHLMKEMMEDDYALPTETQQIARVISSRGNNLHEVETVD
ETFLVSMPNKFRKSMWVKRGDFLLVEPIEEGDKVKAEICKILTPEHIKEY
TKAAIWPDKFTKKPVQEEATSQNKDDSDFEDDLLPNTNRPVNRDSSDEEE
DEETSSEEDASFLDH
BO20644.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:56:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31957-PB | 159 | CG31957-PB | 1..159 | 1..159 | 833 | 100 | Plus |
| CG31957-PA | 159 | CG31957-PA | 1..159 | 1..159 | 833 | 100 | Plus |
