Clone BO20645 Report

Search the DGRC for BO20645

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:206
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG4627-RA
Protein status:BO20645.pep: Imported from assembly
Sequenced Size:646

Clone Sequence Records

BO20645.complete Sequence

646 bp assembled on 2009-05-13

GenBank Submission: KX795869

> BO20645.complete
GAAGTTATCAGTCGACATGCTGGAGCTGCTGTGCCGGGTCAGTCCTGCAA
GATTGCCATGGAGAAGCTGCATGTCCCTAGCCATTCAGCCGGCACAGAGA
CGCCGCTTTGCAACAGAGGCTGCCGGAAAAAGAACGGAAACCGAAAAATC
TGCATTCACTGAATGGCGCACCGTCTATAGTATGCCGGGCATACGGCTCG
TGGCCGCATTAAGTAGGTTGAAAGTCTACCAGGCTGTCATCACGGCCGCC
GGAACGCCCATTGTCTTCGCCCTGGGCAGCGCCGGGCAACTCAGCACGGA
TGCACTGGCCATCTATGCCGCCATTGGAGTCACTGGCCTGATCACCCTCA
CACTAGCCAGCTACGCGTCCTCAAATCTCGTGGGCTTCATCTACGTGAAC
GAGGAACAGGATCTGCTCAAGCTGGCCTACGTAGACTTCTGGGGACGGCG
ACAGGAGACACTCATTGAAACCGAGGATCTGCTGCCGAGCTGGGAGCAGG
GAAGTCCGTCTCGACTCAGATTCGTTTCGCCCATTTGCTTGCGCAGCGAT
TCCAAAAGGCGCTACAAACTCCTTAATCGCTTCGGTCATGTCAGCGATCG
CCAGTTGTTTGAGGGTCTCTTTGGAAATGCAAGCTTTCTAGACCAT

BO20645.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:32:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG4627-RA 615 CG4627-PA 1..612 17..628 3060 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:32:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG4627-RA 988 CG4627-RA 196..807 17..628 3060 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13214969..13215579 18..628 3055 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:32:16 has no hits.

BO20645.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:04 Download gff for BO20645.complete
Subject Subject Range Query Range Percent Splice Strand
CG4627-RA 169..780 17..630 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:26:31 Download gff for BO20645.complete
Subject Subject Range Query Range Percent Splice Strand
CG4627-RA 196..807 17..630 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:33:34 Download gff for BO20645.complete
Subject Subject Range Query Range Percent Splice Strand
CG4627-RA 196..807 17..630 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:33:34 Download gff for BO20645.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13214967..13215579 17..630 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:26:31 Download gff for BO20645.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9102472..9103084 17..630 99   Plus

BO20645.pep Sequence

Translation from 16 to 646

> BO20645.pep
MLELLCRVSPARLPWRSCMSLAIQPAQRRRFATEAAGKRTETEKSAFTEW
RTVYSMPGIRLVAALSRLKVYQAVITAAGTPIVFALGSAGQLSTDALAIY
AAIGVTGLITLTLASYASSNLVGFIYVNEEQDLLKLAYVDFWGRRQETLI
ETEDLLPSWEQGSPSRLRFVSPICLRSDSKRRYKLLNRFGHVSDRQLFEG
LFGNASFLDH

BO20645.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG4627-PA 204 CG4627-PA 1..204 1..204 1033 100 Plus