Clone BO20657 Report

Search the DGRC for BO20657

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:206
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG34386-RC
Protein status:BO20657.pep: Imported from assembly
Sequenced Size:1543

Clone Sequence Records

BO20657.complete Sequence

1543 bp assembled on 2010-10-20

GenBank Submission: KX798260

> BO20657.complete
GAAGTTATCAGTCGACATGTGTTCCAAAGCATTGCTGCTCCTGGCCGTCA
TTCTAGCTGCTCGCTGTTTTGGTAGTGGCTCTTCCAGACGAACGCTCGCC
ATGGCCTGCGAGGAGACGATGGAATCGACGCCGGGGCTCAAAAACAATAG
ATATGGCTATAGAAGCGCCACGGACAACAACTACAACGATTACAACTACA
AGTGGGAGCACGGGGATGTGGACGTTGATGGCATTGCAGATAGCAACGAG
GACGACAACAATGACAACTATAACTACAACAAAGCACCGGCCAAATGGCA
GCAGCAACAGCAGCAAAAACTCTACGGAAATCCCATCCACAGCATATACG
ACAGGCAGCAACATCTACAACGGCAGCAGCAGCAGCAACATGAGCAGCAG
CAACAACAGCAACATCAACAGCAGCAACTCGAACAGCAGCAACAGGGATT
GGGAATGGAAATGGGACTGGGACAGTTTGATGATGATCCAGAGAATGCTC
GCAACGACTTCCGTCTGCAATTGTCCGACTTAAATGCGGCCGTTCAAGGT
ATGGGCAGGTTTGCTGTTACCCAGGACCAGAACAAAGACCAGGACAACAG
CAATAGTAATAGCAACAGCAATGGCAACAGCAACAGCATCATCAAGGACA
ACAGCAACATCGACTGGCTGCAGCCGATGGAGGAGCAGGAGCAATTGTTG
CTGGAGCGTCGCAGCCGCAGCAGCAACATCAACCAAAGGTCAGCCATGGA
TGAAGCAGGCGGAGCAGGGGAACCAGGTCAGCCCGAGTACACCAACAATG
AGTTACCATCTGGCGGTCTAGATGATGTGGACATTGAGGGCGAGGAGGAT
TACGCAGGTCAAGAGGAGGACGCAGACGAACTGAGTTCACAGATGCCCTA
CGGGATACAGAACGTGCGCAAGCGCCGCGTTCGCAGTGTAATGCCACCGG
TACCATTTCTGGGCCCCAATCCCAGCTCAGATGGGGTAGTCACCTATCAG
TCGTTGTGCCCCACAAATCGGGTGACCGTGAAGTTGGAAAGCGGCGATTA
CCGTCCCAATCACTATGTGGAGGTTACATGTGCCCACAACTACTCACCGC
AGCCCTCGAGGAACTATAACTATGAATATGGTTACAGGGGCAATGAACTG
CTCCGAGCTCTGCTCTCCGAGCGAAGCGAGAAACGAGAGATCTGCTCGGC
AACGGGCTTCTCGTGCATCCAGCTCAACCGCACCATCCATCTGATTCGAC
TGAATGACGCCTCCGGCTGCTGGGAATCAGAGACGCGGACGGTGCCCTCT
GGTTGTGAGTGCATGTGGCCGAAGCATAGCTACGGCGATATAGCCTTCTA
CCATCAGGCGCAGAAGAGACGGGCCGGCGTGTCCAGTCTGCGACCCCATG
CACCAATCAATGTGGATTACAAGCCGGGAGTGGGCTACCGCCAGCTGACC
CTGAGGACGAGGAATCCCAAGCCAGCTCCTCGCAGTCGACGCGAGGATAT
GGGCTATGAGAGCTCAGATTTCAACGCAAGCTTTCTAGACCAT

BO20657.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:24:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG34386-RD 1512 CG34386-PD 1..1509 17..1525 7545 100 Plus
CG34386-RC 1512 CG34386-PC 1..1509 17..1525 7545 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG34386-RD 2180 CG34386-RD 507..2016 16..1525 7550 100 Plus
CG34386-RC 1891 CG34386-RC 218..1727 16..1525 7550 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:24:10
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18089961..18090667 34..740 3535 100 Plus
2R 25286936 2R 18093127..18093464 1188..1525 1690 100 Plus
2R 25286936 2R 18092550..18092801 737..988 1260 100 Plus
2R 25286936 2R 18092862..18093066 985..1189 1025 100 Plus
3R 32079331 3R 27737534..27737576 596..638 185 95.3 Plus
Blast to na_te.dros performed 2014-11-26 15:24:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6716..6918 238..444 385 68.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2296..2891 145..735 374 56.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6715..6883 278..445 374 71.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6901 256..442 363 69.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2301..2507 239..445 361 67.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2308..2690 294..669 356 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6741..6943 242..445 334 65.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2314..2524 242..444 333 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2356..2550 242..442 315 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2294..2434 290..444 293 70.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2411 334..445 291 77.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2446 297..444 284 69.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6714..6878 582..744 270 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6456..6889 294..738 264 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2767..2933 283..445 258 65.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6740..6902 572..736 253 65.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2318..2512 571..766 239 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6766..6952 240..424 237 62.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2346..2502 572..733 232 65.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2293..2494 598..797 229 62.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2752..2946 252..446 218 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6929 572..739 218 61.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6715..6912 602..797 217 61.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2587..3032 242..694 213 56.7 Plus
roo 9092 roo DM_ROO 9092bp 1067..1164 572..665 199 72.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6845..7011 572..737 194 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2412 623..733 187 65.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2451 584..733 182 59.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6951 572..731 177 62.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6815..6939 572..693 169 63.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6738..7037 161..446 168 56.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1494..1581 566..661 164 68.8 Plus
BS 5142 BS BS 5142bp 2011..2112 594..696 153 63.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1509..1589 569..645 144 66.7 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3279..3346 601..668 142 67.6 Plus
roo 9092 roo DM_ROO 9092bp 1059..1130 588..661 140 67.6 Plus
rover 7318 rover ROVER 7318bp 1224..1294 567..633 130 67.6 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 518..568 594..644 129 72.5 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3285..3351 595..661 128 65.7 Plus

BO20657.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-20 10:48:45 Download gff for BO20657.complete
Subject Subject Range Query Range Percent Splice Strand
CG34386-RC 219..1727 17..1527 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:31:35 Download gff for BO20657.complete
Subject Subject Range Query Range Percent Splice Strand
CG34386-RC 219..1727 17..1527 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:29 Download gff for BO20657.complete
Subject Subject Range Query Range Percent Splice Strand
CG34386-RC 219..1727 17..1527 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:29 Download gff for BO20657.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18062922..18062939 17..34 100 -> Plus
2R 18089962..18090665 35..738 100 -> Plus
2R 18092552..18092798 739..985 100 -> Plus
2R 18092863..18093066 986..1189 100 -> Plus
2R 18093129..18093464 1190..1527 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:31:35 Download gff for BO20657.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13950427..13950444 17..34 100 -> Plus
arm_2R 13977467..13978170 35..738 100 -> Plus
arm_2R 13980057..13980303 739..985 100 -> Plus
arm_2R 13980368..13980571 986..1189 100 -> Plus
arm_2R 13980634..13980969 1190..1527 99   Plus

BO20657.pep Sequence

Translation from 16 to 1543

> BO20657.pep
MCSKALLLLAVILAARCFGSGSSRRTLAMACEETMESTPGLKNNRYGYRS
ATDNNYNDYNYKWEHGDVDVDGIADSNEDDNNDNYNYNKAPAKWQQQQQQ
KLYGNPIHSIYDRQQHLQRQQQQQHEQQQQQQHQQQQLEQQQQGLGMEMG
LGQFDDDPENARNDFRLQLSDLNAAVQGMGRFAVTQDQNKDQDNSNSNSN
SNGNSNSIIKDNSNIDWLQPMEEQEQLLLERRSRSSNINQRSAMDEAGGA
GEPGQPEYTNNELPSGGLDDVDIEGEEDYAGQEEDADELSSQMPYGIQNV
RKRRVRSVMPPVPFLGPNPSSDGVVTYQSLCPTNRVTVKLESGDYRPNHY
VEVTCAHNYSPQPSRNYNYEYGYRGNELLRALLSERSEKREICSATGFSC
IQLNRTIHLIRLNDASGCWESETRTVPSGCECMWPKHSYGDIAFYHQAQK
RRAGVSSLRPHAPINVDYKPGVGYRQLTLRTRNPKPAPRSRREDMGYESS
DFNASFLDH

BO20657.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:42:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG34386-PD 503 CG34386-PD 1..503 1..503 2699 100 Plus
CG34386-PC 503 CG34386-PC 1..503 1..503 2699 100 Plus
Clk-PH 895 CG7391-PH 623..782 82..229 160 29.7 Plus
Clk-PG 895 CG7391-PG 623..782 82..229 160 29.7 Plus
Clk-PF 961 CG7391-PF 689..848 82..229 160 29.7 Plus