BO20658.complete Sequence
805 bp assembled on 2009-05-13
GenBank Submission: KX799956
> BO20658.complete
GAAGTTATCAGTCGACATGTGTGTGAGAAGCTCACTGGGCAGTGTGATTT
TAATTTACTTTGTCATCTTGCTTCGTTTGGTCAACTTGGTGCTGGCCCAG
AACGAAGGGAATATATCGGAATCGACGGTGGCCACGGGCCGCGAGGAGTG
CGGCAGCACGCAGAAAATGGTGGACGAGTGCTTCAAGGATCTGCCGCCGC
ATCTAATGGATTTCCTACAGAACACGAAAATCGTCATCAGCAAAAAGGAG
ATCACCGCCAAGTGCAACATATTCAACCGTGGCATGAGGTGCTTCGATAC
TTACTCCAAGCGTTGCCTGGACGATCGAAAGATGGGCACGTTTAAGAATA
ATGTGGAGGGAGCTCGGCGATTTTTCTACAAGTTCTGCGGCGACGCCGAT
TTTCAGCGTGACTATCTGAGGCACAAGGACTGCTTTGCATACATCCAACT
GGACTGGGTCACCTGCACCACCGAGTTCGAGAACATCCTTAGTGAAGAGG
TGCACGACGAAAGGCGCAACGCCAGCGAAAAGTTCCTCGAATTCTGCTGT
GCCCGCTACGCGTACGAGAACTGCATCTACAACAGTGCCCGCTTCAAGTG
CTACAAAAACTCGGCGGAGTTTGCCCGCGAGACGGCCAAAATGCTGTCGG
ATGAGAAGCACTTTAGGAACTGTGCCGTCCTCCAGAACATCTGTGCCCAC
GACGCCGCCGTGGCATTGGCCCAGTGGCACTGGATGGCGACGCCGATGAT
GCTGCTCCTGATGCGGCTGGTGGTGCGGATCTGGGCGGCAAGCTTTCTAG
ACCAT
BO20658.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:03:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13408-RA | 774 | CG13408-PA | 1..771 | 17..787 | 3855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:03:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13408-RA | 1189 | CG13408-RA | 81..851 | 17..787 | 3855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:03:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22080462..22080712 | 17..267 | 1255 | 100 | Plus |
3R | 32079331 | 3R | 22082897..22083135 | 549..787 | 1195 | 100 | Plus |
3R | 32079331 | 3R | 22081802..22081949 | 263..410 | 725 | 99.3 | Plus |
3R | 32079331 | 3R | 22082248..22082387 | 410..549 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 11:03:16 has no hits.
BO20658.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:01 Download gff for
BO20658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13408-RA | 1..771 | 17..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:44:19 Download gff for
BO20658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13408-RA | 81..851 | 17..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:37:42 Download gff for
BO20658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13408-RA | 81..851 | 17..789 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:37:42 Download gff for
BO20658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22080462..22080712 | 17..267 | 100 | -> | Plus |
3R | 22081807..22081949 | 268..410 | 100 | -> | Plus |
3R | 22082249..22082387 | 411..549 | 100 | -> | Plus |
3R | 22082898..22083135 | 550..789 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:44:19 Download gff for
BO20658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 17906184..17906434 | 17..267 | 100 | -> | Plus |
arm_3R | 17907529..17907671 | 268..410 | 100 | -> | Plus |
arm_3R | 17907971..17908109 | 411..549 | 100 | -> | Plus |
arm_3R | 17908620..17908857 | 550..789 | 99 | | Plus |
BO20658.pep Sequence
Translation from 16 to 805
> BO20658.pep
MCVRSSLGSVILIYFVILLRLVNLVLAQNEGNISESTVATGREECGSTQK
MVDECFKDLPPHLMDFLQNTKIVISKKEITAKCNIFNRGMRCFDTYSKRC
LDDRKMGTFKNNVEGARRFFYKFCGDADFQRDYLRHKDCFAYIQLDWVTC
TTEFENILSEEVHDERRNASEKFLEFCCARYAYENCIYNSARFKCYKNSA
EFARETAKMLSDEKHFRNCAVLQNICAHDAAVALAQWHWMATPMMLLLMR
LVVRIWAASFLDH
BO20658.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13408-PA | 257 | CG13408-PA | 1..257 | 1..257 | 1381 | 100 | Plus |
CG9896-PA | 253 | CG9896-PA | 23..195 | 36..205 | 169 | 23.7 | Plus |