Clone BO20665 Report

Search the DGRC for BO20665

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:206
Well:65
Vector:pDNR-Dual
Associated Gene/TranscriptCG14511-RA
Protein status:BO20665.pep: Imported from assembly
Sequenced Size:1000

Clone Sequence Records

BO20665.complete Sequence

1000 bp assembled on 2009-05-13

GenBank Submission: KX795345

> BO20665.complete
GAAGTTATCAGTCGACATGAATTTATCCATCCGCGCTATTTCGGCCATCT
GCGGCGTTTTCTTGGGCTGCTGCAGTGGCGTCGTCTTCTTGGAGCTCCTG
GTTAAACTGGATCCCGGCGCTGGAAACCTTATAACTGGCGCCCAGTTTGC
ATTTATTGCCCTCGAGGGCTTCATCTTCACCTCGAAGTTTGGCCTGGCCC
AGAGAGTGATCAGCCTGCGCGACTATGCGCTCCTCGTGGCCATGTTTTTC
CTGACCAGCGTATGCAACAACTACGTGTTCAAGTTCAAAGTTCCAATGAC
ACTGCACATGATCATACGCGGCGGTTCGCTGATCTCCAACATGTGCCTGT
GCACGTTGATCCTGAAGAGGAGTTACCGGTTGAGTCAGTACATATCGGTG
CTCATGATCAGCGTGGGCATTTTCGTCTGCACATATTTCTCCAGTCCGGA
TTTGGTGGGTAAGATGGAGAATTTGGATAGTGGCGCCGAGGCGGATACGT
TCTGGTGGCTGTTGGGCGTGGCACTCTTGGTGCTGGCTCTATTTGTTTCC
TCCTACATGGGAATTACACAGGAGTTGCTGTATCGACGTCATGGCAAGTG
CGCCAGGGAAGCGTTGTATTACACCCACCTGTTGCCGCTGCCCGCCTTCC
TGCTCATGCATGACGACATACGGACGCACTGGCTTTTGGCGTTCACGGGC
GAGTCCTACCAGTTGCCCCTCCTGGGCGTGGCAGTGCCCCTAATCCTGCT
ATACTTATTGGGCAACGTGCTTGCGCAGCATTTGTGCATCAGCTCCGTTT
ACACCCTGACCACGGAGTGCAGCTCGCTGACGGTGACTCTGATCCTCACA
CTCCGCAAGTTCATCTCGCTGGTCTTTTCGATCGTATACTTCCGAAATCC
CTTCACCTGGTGGCACTGGCTGGGCACCGCGCTAGTCTTTGTGGGCACCT
TGATGTTTGCAAATGTGATCAGAGTTCCGAAAGCAAGCTTTCTAGACCAT

BO20665.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:36:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14511-RA 969 CG14511-PA 1..966 17..982 4830 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:36:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG14511-RA 1216 CG14511-RA 92..1058 16..982 4835 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:36:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29145836..29146802 982..16 4835 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:36:45 has no hits.

BO20665.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:56 Download gff for BO20665.complete
Subject Subject Range Query Range Percent Splice Strand
CG14511-RA 1..966 17..984 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:19:00 Download gff for BO20665.complete
Subject Subject Range Query Range Percent Splice Strand
CG14511-RA 93..1058 17..984 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:13:56 Download gff for BO20665.complete
Subject Subject Range Query Range Percent Splice Strand
CG14511-RA 93..1058 17..984 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:56 Download gff for BO20665.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29145833..29146801 17..984 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:19:00 Download gff for BO20665.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24971555..24972523 17..984 99   Minus

BO20665.pep Sequence

Translation from 16 to 1000

> BO20665.pep
MNLSIRAISAICGVFLGCCSGVVFLELLVKLDPGAGNLITGAQFAFIALE
GFIFTSKFGLAQRVISLRDYALLVAMFFLTSVCNNYVFKFKVPMTLHMII
RGGSLISNMCLCTLILKRSYRLSQYISVLMISVGIFVCTYFSSPDLVGKM
ENLDSGAEADTFWWLLGVALLVLALFVSSYMGITQELLYRRHGKCAREAL
YYTHLLPLPAFLLMHDDIRTHWLLAFTGESYQLPLLGVAVPLILLYLLGN
VLAQHLCISSVYTLTTECSSLTVTLILTLRKFISLVFSIVYFRNPFTWWH
WLGTALVFVGTLMFANVIRVPKASFLDH

BO20665.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG14511-PA 322 CG14511-PA 1..322 1..322 1660 100 Plus
Efr-PB 352 CG3774-PB 1..325 1..318 936 54.9 Plus
Efr-PA 352 CG3774-PA 1..325 1..318 936 54.9 Plus