BO20665.complete Sequence
1000 bp assembled on 2009-05-13
GenBank Submission: KX795345
> BO20665.complete
GAAGTTATCAGTCGACATGAATTTATCCATCCGCGCTATTTCGGCCATCT
GCGGCGTTTTCTTGGGCTGCTGCAGTGGCGTCGTCTTCTTGGAGCTCCTG
GTTAAACTGGATCCCGGCGCTGGAAACCTTATAACTGGCGCCCAGTTTGC
ATTTATTGCCCTCGAGGGCTTCATCTTCACCTCGAAGTTTGGCCTGGCCC
AGAGAGTGATCAGCCTGCGCGACTATGCGCTCCTCGTGGCCATGTTTTTC
CTGACCAGCGTATGCAACAACTACGTGTTCAAGTTCAAAGTTCCAATGAC
ACTGCACATGATCATACGCGGCGGTTCGCTGATCTCCAACATGTGCCTGT
GCACGTTGATCCTGAAGAGGAGTTACCGGTTGAGTCAGTACATATCGGTG
CTCATGATCAGCGTGGGCATTTTCGTCTGCACATATTTCTCCAGTCCGGA
TTTGGTGGGTAAGATGGAGAATTTGGATAGTGGCGCCGAGGCGGATACGT
TCTGGTGGCTGTTGGGCGTGGCACTCTTGGTGCTGGCTCTATTTGTTTCC
TCCTACATGGGAATTACACAGGAGTTGCTGTATCGACGTCATGGCAAGTG
CGCCAGGGAAGCGTTGTATTACACCCACCTGTTGCCGCTGCCCGCCTTCC
TGCTCATGCATGACGACATACGGACGCACTGGCTTTTGGCGTTCACGGGC
GAGTCCTACCAGTTGCCCCTCCTGGGCGTGGCAGTGCCCCTAATCCTGCT
ATACTTATTGGGCAACGTGCTTGCGCAGCATTTGTGCATCAGCTCCGTTT
ACACCCTGACCACGGAGTGCAGCTCGCTGACGGTGACTCTGATCCTCACA
CTCCGCAAGTTCATCTCGCTGGTCTTTTCGATCGTATACTTCCGAAATCC
CTTCACCTGGTGGCACTGGCTGGGCACCGCGCTAGTCTTTGTGGGCACCT
TGATGTTTGCAAATGTGATCAGAGTTCCGAAAGCAAGCTTTCTAGACCAT
BO20665.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:36:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14511-RA | 969 | CG14511-PA | 1..966 | 17..982 | 4830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:36:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14511-RA | 1216 | CG14511-RA | 92..1058 | 16..982 | 4835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:36:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29145836..29146802 | 982..16 | 4835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:36:45 has no hits.
BO20665.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:56 Download gff for
BO20665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14511-RA | 1..966 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:19:00 Download gff for
BO20665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14511-RA | 93..1058 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:13:56 Download gff for
BO20665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14511-RA | 93..1058 | 17..984 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:56 Download gff for
BO20665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29145833..29146801 | 17..984 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:19:00 Download gff for
BO20665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 24971555..24972523 | 17..984 | 99 | | Minus |
BO20665.pep Sequence
Translation from 16 to 1000
> BO20665.pep
MNLSIRAISAICGVFLGCCSGVVFLELLVKLDPGAGNLITGAQFAFIALE
GFIFTSKFGLAQRVISLRDYALLVAMFFLTSVCNNYVFKFKVPMTLHMII
RGGSLISNMCLCTLILKRSYRLSQYISVLMISVGIFVCTYFSSPDLVGKM
ENLDSGAEADTFWWLLGVALLVLALFVSSYMGITQELLYRRHGKCAREAL
YYTHLLPLPAFLLMHDDIRTHWLLAFTGESYQLPLLGVAVPLILLYLLGN
VLAQHLCISSVYTLTTECSSLTVTLILTLRKFISLVFSIVYFRNPFTWWH
WLGTALVFVGTLMFANVIRVPKASFLDH
BO20665.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14511-PA | 322 | CG14511-PA | 1..322 | 1..322 | 1660 | 100 | Plus |
Efr-PB | 352 | CG3774-PB | 1..325 | 1..318 | 936 | 54.9 | Plus |
Efr-PA | 352 | CG3774-PA | 1..325 | 1..318 | 936 | 54.9 | Plus |